Gene Snas_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0514 
Symbol 
ID8881697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp538863 
End bp539867 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003509322 
Protein GI291298044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC ACGTCGCGGT GCTGCTGTTC GACGACACCT CCGGGTTCAC CGCCGGAATG 
GCCGCCGAGG TCTTCGGACG TCCCGCTCCC GAGCCCGGCC TCGACTGGTA CGAGTTGTCC
ATGTGCGCGC AGCGGCCGGG GGTGGTGACG GCGCTGGGTG GGGCCCGCTT CGACACCCCG
CACGGGCTGG ACGTCTTCGC CGCCGCCGAC ACCGTCATCG TCCCCGGCGT GCCCAACATG
ACCGATCCGC CGTCGCCCGA GGTCGTCACC GCCGTGCGGC AGGCACACCG TCGGGGGGCG
AGGGTGGTGT CGCTGTGCTC GGGGACCTTC GCACTGGCCG GGGCCGGGAT CCTGGACGGG
CGTCGGGCCG CGACCCATTG GGCGCATGCC GCCGAGCTGC GCGGGCGCCA TCCGCTGGTC
GCCGTCGACT CCGACGTCCT GTACATCGAC GACGGCGACA TCCTCACCAG CGCCGGTCAG
GCCGCCGGGC TGGACCTGTG CCTTCACCTG GTACGCAAGG ACTTCGGCGC CGCGATCGCC
AACCGGGTGG CGCGGCGGCT GGTGGTGCAG CCGCACCGCG AGGGCGGCCA GGCCCAGTTC
ATCGAGACGC CGCTGAGCGC CGATCCCGAG GACGACCGGC TGGCGGCCTC GATGGCCTGG
GCGGCGGCGA ACCTCGACAA ACCCGTCACG ATCACCGTGC TGGCCGAGCG CGCCCACATG
TCGCCGCGCC ACTACCAGCG CAACTTCGCG CGCAGCACCG GAACCAGCCC GATCCGGTGG
CTGATCGAAC AGCGGGTGCG GGCCAGCCTG GCGCTGCTGG AGACCACCGA GTCGTCGATC
GAGCAGGTGT CGGCGGCGGT GGGCTTCGAC ACCTCGGTGA CGTTTCGGCA CCACTTCGCC
CGCCTCATGC GCACCTCCCC CAGCGCCTAC CGGCGCGCGT TTCGCGGCGG CGCGACAGCG
CAGGTATCGT TAGCCGCCGT GTTCACCGTT ACCGGGGCTT GTTGA
 
Protein sequence
MTHHVAVLLF DDTSGFTAGM AAEVFGRPAP EPGLDWYELS MCAQRPGVVT ALGGARFDTP 
HGLDVFAAAD TVIVPGVPNM TDPPSPEVVT AVRQAHRRGA RVVSLCSGTF ALAGAGILDG
RRAATHWAHA AELRGRHPLV AVDSDVLYID DGDILTSAGQ AAGLDLCLHL VRKDFGAAIA
NRVARRLVVQ PHREGGQAQF IETPLSADPE DDRLAASMAW AAANLDKPVT ITVLAERAHM
SPRHYQRNFA RSTGTSPIRW LIEQRVRASL ALLETTESSI EQVSAAVGFD TSVTFRHHFA
RLMRTSPSAY RRAFRGGATA QVSLAAVFTV TGAC