Gene Snas_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0501 
Symbol 
ID8881684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp526719 
End bp527048 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID 
Productanti-sigma-factor antagonist 
Protein accessionYP_003509309 
Protein GI291298031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.868486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA CAATCCGCAC CCGGACTGAC GGTGAGTACA CGGTGGTCGC GGTGGGTGGC 
GAGATCGACA TGTTCACGGC GACCGAACTG CGTGAGGCCC TGCACGCCGA ACTCGCCAAG
AACGTCTCCA GGCTGGCCAT CGACGTCAAC GGGGTAGAGT TCTGCGACTC GACCGGACTG
GGCGTCATCA TCGGTGTGCT GCGGCGGCTG CGAGAGAGCG GCGGCAAGCT GGTCATCGTG
TGCGCCCGTC AGCAGATGCT CAAGATCTTC CAGCTGACCG GGCTGGACAC CGTCCTCGAC
ATCCGCGCCG AACTTCCGGC GGACGGCTGA
 
Protein sequence
MELTIRTRTD GEYTVVAVGG EIDMFTATEL REALHAELAK NVSRLAIDVN GVEFCDSTGL 
GVIIGVLRRL RESGGKLVIV CARQQMLKIF QLTGLDTVLD IRAELPADG