Gene Snas_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0467 
Symbol 
ID8881650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp486710 
End bp487855 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003509275 
Protein GI291297997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.411945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000353045 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGGACG ACAGATACGA CAGGATCCAG GCGGCACTGG ACCGGGTGGT GGCCGACGGC 
AGCGCCCCCA GCGCCGTCGC CCACCTCAAG GACGGCGACG GCACCTGGTT CGGTTCGGCC
GGGGTCGCCG ACCTGGAGAC AGGACGCCGC CGCGACCCGA AGGACCGGTT CCAGGTCGGC
AGCATCGGCA AGGCGTTCAC GGCCACCGCG CTGCTGACGC TGGAAGCAGA GGGAGTGCTG
AACCTCGACG ACACTGTGGA CACCTGGTTG CCGGGAGTGA TCCGAGGCAA CGGCAACGAC
GGCACCAGGA TGACCCTCCG GCAGCTGCTG TCCAACACCA GCGGCCTGGG TACGACCGGC
CTGAGCCCCG AGATCGTGCG CCGCTACCAC ACCCGGTCCG GGTTCGCCGA GAACCGTTAC
CACGTCTGGA CAGTGGACGA ACTGATCCGG GTGCAGCTGG ACATTCCGGC GGTGTTCGCG
CCCGGCGAGG GCTTCTCGTA CGCCAACGGC GGCTTCCAGA TCGCCGGGGC GGTCATCGAG
AAGGCCACCG GGCGCAGTTA CCAGCAGGAG ATCGACCGGA CCGTCATCCA ACCGCTCGGA
CTGCCCGACA CGTACACACA GGACCTTTCC GAGTCGCGGT TCCGGGGCCA GCACTGCAAG
GCCTACTCGA AGGGACTGTT CATCAGGGAC GACGTCGACC CCGACATTCT CACCGCCGAG
AACTACCAGT CGCTTCTGGA GGAACCGGCC GGCGATCCGC TCGACATCAC CGAGCGGACC
TACTTCGAGG GCGCCGCCGG TTGCGTCGTG TCGACCACCG GCGACCTGCT CACCGTCGCC
GAGGCGCTCA TCACCGGCTC GCTGCTGCCC ACCGACCAGC ATCGCGCTAT GTGGACGACC
GTCGCCACCG CGAACTGGCT CCCCAACGCC CGTTACGGTC TCGGGGTGTC GCAGTGGCGG
CTGGCCGACG GCCGACAGCT GCACGTCATG TCCGGGATGA CCGGCGGCAC CGCCTGCCTG
GCGCTGGGCA CTCCCGACGG CGAGACCGTC CTGGCCACGC ACGTCAACGG CGACTGGAAC
TGGTACCTGG CCTTCTACCA GATCGCTGAG GCCGTGTTCG GTTCCCCGTT CGACGTTTCC
GAGTAG
 
Protein sequence
MADDRYDRIQ AALDRVVADG SAPSAVAHLK DGDGTWFGSA GVADLETGRR RDPKDRFQVG 
SIGKAFTATA LLTLEAEGVL NLDDTVDTWL PGVIRGNGND GTRMTLRQLL SNTSGLGTTG
LSPEIVRRYH TRSGFAENRY HVWTVDELIR VQLDIPAVFA PGEGFSYANG GFQIAGAVIE
KATGRSYQQE IDRTVIQPLG LPDTYTQDLS ESRFRGQHCK AYSKGLFIRD DVDPDILTAE
NYQSLLEEPA GDPLDITERT YFEGAAGCVV STTGDLLTVA EALITGSLLP TDQHRAMWTT
VATANWLPNA RYGLGVSQWR LADGRQLHVM SGMTGGTACL ALGTPDGETV LATHVNGDWN
WYLAFYQIAE AVFGSPFDVS E