Gene Snas_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0396 
Symbol 
ID8881578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp401663 
End bp403009 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003509206 
Protein GI291297928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.290872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.769323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC GACGCGAACA GGTCGCCGCG CACCGCTTCA TCGTGCGGCG CGTCATCTCC 
GCGATGCTCA ACGGCGAGCC CGAGACCCTG GATCTGCCGA TGCGCCGGAT GGCGATCTCG
GCGATGGTCG GCGTCGCGAT CGCCTCGCTG GTCTTCGCCG GATTCTGGGT GGTCGGCCTG
ATCTGGCCCG GCGGCGCCCA GTCCTGGCAG AAGGACGGCG CCGTCATCGT CGAAGAGGAG
ACCGGCGCCC GGTTCGTCTA CTGGGACGGC CAGCTGCACC CGGTGCTCAA CTACGCGTCG
GCGCTGCTCA TCACCTCCAG CGGCGACCGC ACCGTCCACA CCGTGCTGCA GGATTCGCTG
GCCGACACCC CGCGCGGCGC CACCCTCGGC ATCCCCGACG CCCCCGACAC GCTGCCCGAG
CCGGAGCTGT TCACCGCCTC GCCCTGGCAG ACCTGCTCGG CGCCCAACCC CAGCGATCCC
ACCAGCATCG AGTCGCACGT CATCATCGGC GACACCCCCG ACGGCGGCGA CGCGCTGTCG
TCCGACGGCC TGCTGCTCAA ACACGACGGC GACATCTTCC TCGTCGTCAA GGACACCAAG
TACCTGGTGC CCAGCGAGAA GTCGCTGCCC GCGCTGGGCG CCGACCCCGA CCAGGTCGTC
AAGGTGGACC CGGTGTTCCT CAACGCGCTG GAGACCGGCC CCAACCTGAA GCTCAAGATC
CCCGGCGAGG GTGACGACGG CATCGAACTG GACGGCGAGA CCTACCCGAT CGGCACCGTG
TTCACCAACA ACGACCGCCA CTACGTACTG CTGAAGGACG GCCTGGCCGC CATCGGCGAA
CTGGCCGCCG AGCTGATCGG CACCGAACCG GTGGCGCTGT CCAGCGCGGC GGTCGGCGAG
AACCGCACCG ACGAGAAGCT CGAGCCGGAG GGGTTCCCGT CCCGCCGACC CGACGTCATG
GGAATCCCCG ACGCCCGCCA GACCGCGGTG TGCGCGGACT GGACCAAGGG CAAGACCACC
GTGACGGTGT ACTCGTCGGT GCCGAAACTG GTGGGCGACA ACGTCAAGGC GGCCCCCAAG
GGCATCGAGG ACGTCAGCAC CGCCGACCAT GTCCGGCTGC CCGGCGGCTA CGGCTCGCTG
GTGCGGGCCC AGTCCAGCGA GGGCGCGTCG GGCGGCACGG TCTTCCTGGT CACCGACCAG
GGCTGGAAGT TCGGTCTGAG CTCCGAGGCG CTGACCGCGT TCGGCTACAA GAAACTCAAA
CCGACGCCGA TGCCGTCCGC GCTGGTGGCG TTGCTGCCGA CCGGGCCCGA GCTGAGCCAG
TCCGCGGCGC TGCGGGCGAT CCGATGA
 
Protein sequence
MRTRREQVAA HRFIVRRVIS AMLNGEPETL DLPMRRMAIS AMVGVAIASL VFAGFWVVGL 
IWPGGAQSWQ KDGAVIVEEE TGARFVYWDG QLHPVLNYAS ALLITSSGDR TVHTVLQDSL
ADTPRGATLG IPDAPDTLPE PELFTASPWQ TCSAPNPSDP TSIESHVIIG DTPDGGDALS
SDGLLLKHDG DIFLVVKDTK YLVPSEKSLP ALGADPDQVV KVDPVFLNAL ETGPNLKLKI
PGEGDDGIEL DGETYPIGTV FTNNDRHYVL LKDGLAAIGE LAAELIGTEP VALSSAAVGE
NRTDEKLEPE GFPSRRPDVM GIPDARQTAV CADWTKGKTT VTVYSSVPKL VGDNVKAAPK
GIEDVSTADH VRLPGGYGSL VRAQSSEGAS GGTVFLVTDQ GWKFGLSSEA LTAFGYKKLK
PTPMPSALVA LLPTGPELSQ SAALRAIR