Gene Snas_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0353 
Symbol 
ID8881533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp359458 
End bp360477 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content73% 
IMG OID 
ProductRNA methyltransferase TrmH family, group 3 
Protein accessionYP_003509164 
Protein GI291297886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTA ATTCACAGCC GAGGAACAAG CGGGTGTCGT CCAAGAAGGG CGCCACCAAG 
GGCAGCGGCG GTCAGGGCAA GAAGTCGCTG GCGGGCCGGG GCAAGACGCT GTCGGCCGCG
GACCGTCCCT GGCACAAGGC CTACACGGGC ACCGACGTGC CCAAGAAGAC CAAGTGGAAG
CAGGAGAAGG AACGCCGGGC GGCGGCGGCC GAGGGCCGGG CCCCCAAGGC GGGCCGTCCC
AAGCGTCCGT CGACCCAGTC GAAGCGACGC GACTCCGACG GTGTCGACGT GCTCGTCGGC
CGCAACCCGG TCGTGGAGGC GCTGCGGGCG CACGTGCCCG GCACCGCACT GTACGTCGTC
AACGGCACCG AGCTCGACGA CCGGATCCGC GAGTCGATCC GGCTGGCGGG CAACCGGGGT
ATCTCCATAC TGGAGGTCAG CAAGTCCGAA CTGGACCGGC TGTGCCAGGG CGCGCTGCAC
CAGGGCCTGG GCCTGCAGGT GCCGCCCTTC CACTACGAGG AGTACGCCGA CGTGCTGGCG
GCGGCGGGCG AACACCCGCA ACCGCCGCTG CTGGTCGCGC TGGACGGCGT GACCGACCCG
CGCAACCTCG GCGCCACCAT CCGCTCCGCG GCGGCGTTCG GCGCTCACGG CGTCGTCGTT
CCGCAGCGCC GGGCCGCCGG TATGACGGCG ACGGCGTGGC GGGCCTCGGC GGGAGCGGCG
GCGCGGCTGC CGATCGCCAA GGCCACCAAC CTGACCCGCG CCATCCAGCA GGCCCAGCAG
GCGGGGCTGT TGGTGGCGGG CCTGGACGCG GACGGCGAGA TCGACCTGTT CGACCTGCCC
GCCGCGGTCG ACCCGCTGAT GCTGGTCGTG GGTTCCGAGG GCCGGGGGCT GTCGCGGCTG
GTCGGCGAAT CCTGTGACCT GCGGGTGCGC ATCCCGATCG CCTCGGCGGT CGAGTCACTC
AACGCGGCCG TCGCGGCGTC GGTGGCGCTG GCCGAGGTGA CCCGTCGGCG GTTGGCCTGA
 
Protein sequence
MPGNSQPRNK RVSSKKGATK GSGGQGKKSL AGRGKTLSAA DRPWHKAYTG TDVPKKTKWK 
QEKERRAAAA EGRAPKAGRP KRPSTQSKRR DSDGVDVLVG RNPVVEALRA HVPGTALYVV
NGTELDDRIR ESIRLAGNRG ISILEVSKSE LDRLCQGALH QGLGLQVPPF HYEEYADVLA
AAGEHPQPPL LVALDGVTDP RNLGATIRSA AAFGAHGVVV PQRRAAGMTA TAWRASAGAA
ARLPIAKATN LTRAIQQAQQ AGLLVAGLDA DGEIDLFDLP AAVDPLMLVV GSEGRGLSRL
VGESCDLRVR IPIASAVESL NAAVAASVAL AEVTRRRLA