Gene Snas_0204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0204 
Symbol 
ID8881382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp218568 
End bp219467 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003509016 
Protein GI291297738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.497209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.169553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA ACCCGACCAA GGCCCACACG AGGTGGTTCA CCCCGTACGT CTTCCTGGCG 
CCGTACCTGG TGCTGTTCTC CGTCTTCGTG CTGGCGCCGG CGGTGTACGG GCTGTGGATC
AGCCTGCACG AATGGGACTA CATGCTGCCC AGCCAGCCGT GGGTCGGCCT GGACAACTAT
GTGGACCTGT TCGACTCGGA GTCGCTGGTG TTCGGCGACT TCTGGTCCAG CATGAGCGCG
ACCGGGATCT TCACCGTCGC CAGTGTCCCG TTCCTGGTGG TGATCCCGCT GGGAATCGCG
CTGCTGCTGA ACCGGAAGTT CCCGGGCCGC AACGTGTTCC GCGCCATCTA CTTCGCCCCG
TACGTGCTGG GCGTCGCCGT CGTCGGTCTG CTGTGGCGGT TCCTGCTCGA CCCCAACATC
GGCGGCGTCA ACTACCTGCT CGGCCTGCTC GGGCTGCCCG ACGACATCGC CTGGGTCAAC
TCGCTGCCGT GGGGCTGGAT CGCGCTGGTG GGCATGACGG TGTGGTGGAC GCTCGGCTTC
AACGCCGTCA TCTACCTGGC CGGGTTGCAG GACGTGCCCC GGCACCTGTA CGAGGCGGCC
GAGCTCGACG GCGCCACGGC CTGGCAGCGG TTCTGGCACG TCACGCTGCC GGGCCTGCGT
CCGGTGACCG CCTTCGTCGT CACCGTCACG ATCCTGGCCT CCGCCAACAT GTTCGGACAG
TCCTATCTGG TCACCCAGGG CGCGCCGGGC GACGACACCC GCACCGCGAT CATGTACATC
GCCGAGGAGG GCCTGCGGGC CTTCCGGATG GGCAACGCCG CGGCCATGGG TTTCGTGCTG
GCCCTGATCC TCGGGGTGAT CAGCGTCCTG AACTTCCGGC TGCTGCGGTA CAAGGAGTAA
 
Protein sequence
MARNPTKAHT RWFTPYVFLA PYLVLFSVFV LAPAVYGLWI SLHEWDYMLP SQPWVGLDNY 
VDLFDSESLV FGDFWSSMSA TGIFTVASVP FLVVIPLGIA LLLNRKFPGR NVFRAIYFAP
YVLGVAVVGL LWRFLLDPNI GGVNYLLGLL GLPDDIAWVN SLPWGWIALV GMTVWWTLGF
NAVIYLAGLQ DVPRHLYEAA ELDGATAWQR FWHVTLPGLR PVTAFVVTVT ILASANMFGQ
SYLVTQGAPG DDTRTAIMYI AEEGLRAFRM GNAAAMGFVL ALILGVISVL NFRLLRYKE