Gene Snas_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0113 
Symbol 
ID8881290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp120723 
End bp121859 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content69% 
IMG OID 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_003508927 
Protein GI291297649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0453825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.258099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT TCCGTGGCCT CGCCAAGCGA GCCCTGCGCA AGACCACCGG CCGCCGTGCC 
CACCACGAGC CCAAGCCCCC CGAGGCCGCC GCCGTCGAGC GCGCCCCGGT GCCCGGCTCC
AGCCTCATCG ACGCCGCCGT CTACCGCGAC GGCCGCCGCG TCTCCACCCC GTCCTCGCTG
GCCGAGACCT ACCGCGAGGC GCGCTCTGAC CCCGAGACCA TGGCCTGGAT CGGCCTCTAC
CGGCCTACCC CCGGCGAGCT GAAGTCGCTG GCCATCGAGT TCGACCTGCA TCCGCTCGCC
CTGGAAGACG CCCTGGAGGC CCACCAGCGC TCCAAGCTGG AGCGTTACGG GGACACCCTG
TTCGTGGTAC TGCGCGCCGC CCGCTACCTC GACGACGACG AGTCGGTCGA CTTCGGCGAA
CTGCACATCT TCGTCGGGCC CGGCTTCGTC ATCACGGTCC GGCACGGCGC CGCCCCCGAC
CTGGCGGTGG TGCGCAAGCG CATGGAGGCC GAACCCGAAC TGCTGGCCCG GGGCCACGAG
GCGGTGCTCT ACGCGATCTT CGACGCCGTC GTCGACGGCT ACGTCCCGGT CGTGGCCGGG
CTGCAGAACG ACATCGACGA GATCGAGACC GAGGTCTTCG GCGGCGACCC GCAGGTGTCG
CGACGCATCT ACGAACTGTC CCGCGAGGTG GTGCAGTTCC AGCGCGCCGT CCGCCCGCTG
TCGGGGATGC TGCGCGGCCT CATCAGCGGC TTCGAGAAGT ACGGCATCGA CGAGGAGCTG
CGCCGCTACC TGCGCGACGT CGCCGACCAC GCGGTGTCGG TGATGGAACA GGTCGACAGC
TTCCGGCAGG CGCTGGCCGA CATCCTCACC GTCAACGCCA CCCTGGTCGC GCAGCAGCAG
AACGCGAAGA TGCAGGAGAT GACGGAGACG AGCCTGGCGC AGAACGACGA GATCAAGAAG
ATCTCGTCCT GGGCGGCGAT CCTGTTCGCA CCGACCCTCA TCGGCACCGT CTACGGCATG
AACTTCGACT ACATGCCCGA GACGCACTGG AAGGTCGGCT ACCCGATGGC GATCGTGGCG
ATGGCCGCGA CCTGTGTGAC CCTGTACCTG ATCTTCAAGC GCCGCAACTG GCTCTGA
 
Protein sequence
MSDFRGLAKR ALRKTTGRRA HHEPKPPEAA AVERAPVPGS SLIDAAVYRD GRRVSTPSSL 
AETYREARSD PETMAWIGLY RPTPGELKSL AIEFDLHPLA LEDALEAHQR SKLERYGDTL
FVVLRAARYL DDDESVDFGE LHIFVGPGFV ITVRHGAAPD LAVVRKRMEA EPELLARGHE
AVLYAIFDAV VDGYVPVVAG LQNDIDEIET EVFGGDPQVS RRIYELSREV VQFQRAVRPL
SGMLRGLISG FEKYGIDEEL RRYLRDVADH AVSVMEQVDS FRQALADILT VNATLVAQQQ
NAKMQEMTET SLAQNDEIKK ISSWAAILFA PTLIGTVYGM NFDYMPETHW KVGYPMAIVA
MAATCVTLYL IFKRRNWL