Gene Snas_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0080 
Symbol 
ID8881257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp89655 
End bp90515 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content70% 
IMG OID 
ProductPoly(3-hydroxybutyrate) depolymerase-like protein 
Protein accessionYP_003508895 
Protein GI291297617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA TGCGAACCCT GCGCGGCCTG GCGGTACTGG CGTTGCTGGC CGTTGCCGTC 
GGCTGCGGTG GCCCCGGCGA GGCCGGGTCA CAGGACAAGG CCGACGACAA GACCGAGACG
AAGGCCGACC CCGGCGAGCC CGGCCTCCAC AAGAAGGTCA AGGTCGACGG CGGCAAGACC
TACGACGTCT ACGTGCCCAA GGGCCGCTCG CTCGACGAGC CGGTACCGGC GGTGCTGGTG
CTGCACGGCA TGCCCGGCGA CGCCGCCGAA GCCCGGGAAC AGTCGGGGCT GGACGCGCTC
GCCGACGAGG AGGGCTTCCT GGCCGTCTAC CCCGACAACC CGAACGGCAG CTGGACCCCG
AACCCCGACG ACGAGGGCGA CAGCGACTTC GTCCGCGACA TCATCACCGA CCTGACCGGT
ACCTGGAACG CCGACCCGAA GCGGATCTTC GTGTCCGGCA CCTCCAACGG CGGCGACATG
GCGCTGACCA TCGGCGCGAA GCTGCCGGAT CTGGTCGCGG GGATCGCGGC GGTCGTTCCG
GCGGGCACCG AGGAGGTCGC GAAGGTGATG GACGCCGTCG AGACACCGGT GCCGTTGATC
GCCTTCTTCG GCGGCAACGA CCCGCGCGAG GGTCTCGGCC TGGACCTGGT GGCCACCTGG
CGGGACCGCG TCGAGTGCGG CAAGGCCAAG ACCGACAAGG GAAAGCAGGT CACGGTCCGC
GAATACGCGT GCGCCGACGA CACCGCGGTG GTGACGCAGG AGGTGCACGA GGGCTTCCAC
GAGTGGTTCG GCACCGCCGC CGAACCCGAA CCGGTGTGGG CTTCGGCGGC GATGTGGGAG
TTCTTCACCC GGAAGTCGTG A
 
Protein sequence
MTAMRTLRGL AVLALLAVAV GCGGPGEAGS QDKADDKTET KADPGEPGLH KKVKVDGGKT 
YDVYVPKGRS LDEPVPAVLV LHGMPGDAAE AREQSGLDAL ADEEGFLAVY PDNPNGSWTP
NPDDEGDSDF VRDIITDLTG TWNADPKRIF VSGTSNGGDM ALTIGAKLPD LVAGIAAVVP
AGTEEVAKVM DAVETPVPLI AFFGGNDPRE GLGLDLVATW RDRVECGKAK TDKGKQVTVR
EYACADDTAV VTQEVHEGFH EWFGTAAEPE PVWASAAMWE FFTRKS