Gene Snas_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0053 
Symbol 
ID8881229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp60375 
End bp61211 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508868 
Protein GI291297590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGC GCCGGAGTAT CTCCCGTTCA CGCCTGGCCC CGGTGGCGCT GTTCCCGTAC 
CGGCTGGCCA GGGTGTTCCG TCATGACCGC AAGGTCGTCG GCCGCTCGCT GAAATGGCTG
TTCACCTCGC GCGAGCACCA CAACTTCACC TACGACCTGA CCAAGATCAA CCGCGGCCAC
CTGGCCTGGT TCATCAGTGC CGTGTGCGAC GTCCCGGTCA AGAAGGTACG CGAATACCTG
GACGAAGTGG AGAACGACAC CGAACTGGTC GAGCACATCA GCAGCACCAC CGCGAGTTCG
GCACGTCGCG GCCTGACCGA CCGCAAGGCC CGCTACGCCC GCCGGATGGG CTGGTACGCC
CTGGTGCGGA TCCTCAAACC CCAACACGTC GTCGAAACCG GAGTCGACAA AGGACTCGGC
ACCTGCGTGC TGGCCGCCGC ACTGCGCCGC AACGCCGCCG AGGGCCACCC CGGCCGGGTC
ACCGCCGTGG ACATCAACCC CGAGGCCGGG TTCCTGGTGC GTTCCGGCCC CTACGCCGAG
GTCGTCGACC TGGTGCTCGA CGACTCGATC GCGACGATCA AGAACCTCGA CCGGCCGGTG
GACCTGTTCA TCCACGACAG CGACCACGCC GCCGAGCACG AGAAACGCGA GTTCAAGACC
GTCGAGAACA AGCTGGCCGA CAACGCGGTC CTGCTCACCG ACAACGCCTC CGTCACCAAC
GTGCTCGCCC GGCACGCCGA CAAGACCGGC CGCCGGTTCC TGTTCTACCG CGAACAGCCC
GCCCGGCACT GGTTCGCCGG TGAGGGCATT GGCGTGGCCT GGTGGCCCGG CCGCTAG
 
Protein sequence
MSLRRSISRS RLAPVALFPY RLARVFRHDR KVVGRSLKWL FTSREHHNFT YDLTKINRGH 
LAWFISAVCD VPVKKVREYL DEVENDTELV EHISSTTASS ARRGLTDRKA RYARRMGWYA
LVRILKPQHV VETGVDKGLG TCVLAAALRR NAAEGHPGRV TAVDINPEAG FLVRSGPYAE
VVDLVLDDSI ATIKNLDRPV DLFIHDSDHA AEHEKREFKT VENKLADNAV LLTDNASVTN
VLARHADKTG RRFLFYREQP ARHWFAGEGI GVAWWPGR