Gene Snas_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0051 
Symbol 
ID8881227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp57727 
End bp59718 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content70% 
IMG OID 
ProductBeta-galactosidase 
Protein accessionYP_003508866 
Protein GI291297588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCT TCAACGAGCG TCTCAGCCGT ATCGCCTTCG GCGGCGACTA CAACCCCGAG 
CAGTGGGACG AGGAGGTGTG GGCCGAGGAC ATGCGGCTGA TGACCGAGGC CGGAGTGTCC
ATGGTGAGCC TGGGCATCTT CTCGTGGGCG AAGGTCGAGC CGCGACCCGG CGAGTACGAC
TTCGGCTGGG TGGACCGCAT CTTCGAGCTG TTGTCCGCCA ACGACATCGC GGTGTGCCTG
GCGACCATGA CGGCCTCGCC GCCGCCGTGG CTGGCCCGGC TGCATCCCGA GACGCTACCG
ATGCTGCCCG ACGGTTCCCG GCTGTGGCCG GGCGGACGGC AGCACTACTG TCCGTCCTCT
CCGGAGTACC GCCGCTACGC CACCCGGCTG GTGGCCAAGC TCGCCGAACG CTACGGCGAC
CACCCGGCGC TGGCGATGTG GCACATCGGC AACGAGTACG GATGCCATGT CCCCGAATGC
TTCTGCGACG TCTCGGCGGT CGCGTTCCGC GGTTGGCTGC GCGAACGGTA CGGCGACCTC
GACACCCTCA ACGACGCCTG GTCGACGAGC TTCTGGTCGC AAGCGTACGG AGACTGGGAC
GAGATCTTCC CGCCCCGCTC GGTGCCCGCG TTCCACAACC CGGCGCAGCG GCTGGACTTC
TCGCGCTTCA GCTCGGACGA ACTGCTGGCC TGCTACCTCG CCGAAACCGA GATCACCAAC
CGGGTCACCC CGAACGTCCC GGTCACCACC AACTTCGTGG GCGCCTGGCG CCGCATCAAC
ACGATGAAAT GGGCCCGGCA CATGGACGTC GTCAGCTACG ACTCCTATCC GGACCCGCAC
GACCCCGAGG CCGCCGCCGA CTCCGCGCTG GCCTACGACC TGATGCGGTC CTTGCGCGAC
GGCCAGCCCT GGCTGCTGAT GGAGCAGGCG CCCAGCGCCG TCAACTGGCG GGAACGCAAC
GGCGCCAAGC CACGCGACGT CATGCGACTG TGGAGCTGGC AGGCGATCGC GCACGGCGCC
GACTCGGTGC TGTACTTCCA GTGGCGGGCC TCGCGCGGCG GCGCCGAACG GTTCCACAGT
GGCATGGTGC CGCACGCGGG CGAGAACACC CGAATCCACC GCGAGATCCG GCAGCTCGGC
AACGAACTGA AGGGACACTC GGCGCTGGTG GGCACCCGAC AGACGTGCGA CGTCGCGCTG
GTCATCGACT GGGACTCCGG CTGGGCCGTC GAGGGAACCT CGCACCCCAG CGACGACGTC
CGGCTCATGG ACGCCGTGGC CGCGCACCAC CGTCCACTGT ATGACGCCAA CGTGGCGGTC
GACTTCGTGC GGCCCGGCGC CGACCTGTCG AAGTACAAGC TGGTCGTGGT GCCGAACCTG
TACCTGGTCA GCGAAGCCGA CGCGCGGAAC ATCTCCGACT ACGTCCACGG CGGCGGCACG
GTTTTGATGT CGTTCTTCTC CGGCATCGTC GACGAGTACG ACCGGGTTCA CCTCGGCGGC
TACCCGGCGC CGTTCCGGGA ACTGCTGGGA CTGTGGATCG AGGAGTTCTG GCCGCTGCCG
CGGGGCGGAA GCACCGGCAT CAGCTTCGAC GGCGATCTGT CCGCTTTGGG CAGTGACACC
GCGACGCGGT GGTCGGAGGT CATCCGCACC GAGGGGGCCG AGACCCTGGC GACCTTCGCC
GGTGGCGACC TGGACGGCGA ACCGGCCGCC ACCCGGCATC GCTTCGGCGA CGGCGAGGCG
TACTACCTGG GCACCCGTCC CAGCCCGGAA CGGATGCGGT CGCTGCTGGA CCACCTGCGG
CAGCGCACCG CCGTCGCACC GACGCTGGCG GACCTGCCCG ACGGCGTCCA GGCCCGCACC
CGGGTCGGCG AGGACGGCAC GGCGCACCAC ATCCTGCTCA ACCACACCGC GCGGCCGGTG
ACCGTCACCG TGGACGGTGC CGCGGTCGAG TTGGCCGCGC ACGACGTCGC GGTGGTGACC
GCGAAGGCCT AA
 
Protein sequence
MARFNERLSR IAFGGDYNPE QWDEEVWAED MRLMTEAGVS MVSLGIFSWA KVEPRPGEYD 
FGWVDRIFEL LSANDIAVCL ATMTASPPPW LARLHPETLP MLPDGSRLWP GGRQHYCPSS
PEYRRYATRL VAKLAERYGD HPALAMWHIG NEYGCHVPEC FCDVSAVAFR GWLRERYGDL
DTLNDAWSTS FWSQAYGDWD EIFPPRSVPA FHNPAQRLDF SRFSSDELLA CYLAETEITN
RVTPNVPVTT NFVGAWRRIN TMKWARHMDV VSYDSYPDPH DPEAAADSAL AYDLMRSLRD
GQPWLLMEQA PSAVNWRERN GAKPRDVMRL WSWQAIAHGA DSVLYFQWRA SRGGAERFHS
GMVPHAGENT RIHREIRQLG NELKGHSALV GTRQTCDVAL VIDWDSGWAV EGTSHPSDDV
RLMDAVAAHH RPLYDANVAV DFVRPGADLS KYKLVVVPNL YLVSEADARN ISDYVHGGGT
VLMSFFSGIV DEYDRVHLGG YPAPFRELLG LWIEEFWPLP RGGSTGISFD GDLSALGSDT
ATRWSEVIRT EGAETLATFA GGDLDGEPAA TRHRFGDGEA YYLGTRPSPE RMRSLLDHLR
QRTAVAPTLA DLPDGVQART RVGEDGTAHH ILLNHTARPV TVTVDGAAVE LAAHDVAVVT
AKA