Gene Snas_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0050 
Symbol 
ID8881226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp56882 
End bp57718 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003508865 
Protein GI291297587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.66981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC GCGCCAAGAT CATCACGACC GCCGTCCTCA CGGTCGTGGC CGTCTACTTC 
CTGCTGCCGG TGTACTGGCT CATCGTGGCG GCCACCAAGA CCACCGAGGA CCTGTTCGGC
TCCAACGGAC TGTGGTTCTC CAGCCCGCGA CTGTGGACGA ACATGGTCGA GCTGTTCACC
TTCCAGGACG GCATCTACCT GCGCTGGACC CTCAACAGCA TCCTGTACGC GGGAGTGGGC
GCCCTGTGCG CCACCTTCAT CTGCGCCATG GCCGGATACG GACTGGCCAA GTACCGCTTC
GCCGGTCGCG AGAAGGTCTT CAACCTGGTG CTGGGCGGCG TCCTGTTGCC CGCCACCGCG
TTGACGCTGC CGCTGTACCT GTTGATGAGC GAATTCTCGA TGGCCAACAC CTACTGGGCG
GTGCTGCTGC CCGCGATGGT CAGCCCGTTC GGTGTCTACC TGTGCCGCAT CTACGCCGCG
GCGGCGGTCC CGGACGAACT GCTGGAGGCC GCCCGCATCG ACGGCGCCAG CGAGTTCCGG
GTCTTCCTGA CCGTGGCGCT GCGCATCATG ACGCCCGCAC TGGTGACGAT CTTCCTGTTC
CAGTTCGTCG GGATCTGGAA CAACTACTTC CTGCCCCTCA TCATGCTGTC CGACTCGAAC
CTGTACCCGA TCACGCTGGG ACTGACGTCC TGGCAGGGCT TCGCCAGTCG GCAGCCGATT
CTGTATCAGC TGACGGTCGG CGGCGCGTTC GTGTCCGTCA TCCCGCTGAT GATCATGATG
GTTGTCCTGC AGCGCTTCTG GAGGACCGGA CTCACACAAG GGAGTGTCAA AGAGTGA
 
Protein sequence
MTARAKIITT AVLTVVAVYF LLPVYWLIVA ATKTTEDLFG SNGLWFSSPR LWTNMVELFT 
FQDGIYLRWT LNSILYAGVG ALCATFICAM AGYGLAKYRF AGREKVFNLV LGGVLLPATA
LTLPLYLLMS EFSMANTYWA VLLPAMVSPF GVYLCRIYAA AAVPDELLEA ARIDGASEFR
VFLTVALRIM TPALVTIFLF QFVGIWNNYF LPLIMLSDSN LYPITLGLTS WQGFASRQPI
LYQLTVGGAF VSVIPLMIMM VVLQRFWRTG LTQGSVKE