Gene Snas_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0045 
Symbol 
ID8881221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp51944 
End bp53089 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content72% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003508860 
Protein GI291297582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCG ACCGGATCGA GACCTTCCTG GTGCCGCCCC GCTGGCTGTT CTGCCGCGTC 
GAAACCGACG AGGGGCACGT CGGCTGGGGC GAGCCGGTCG TCGAGGGCCG GGCCGCGACG
GTGCGCACCG CCGTGACCGA ACTGGGCGAG TACCTCGTCG GACGCGACCC GCTGCCCATT
GAGGACCACT GGCAGGTGCT CACCAAGGGC GGCTTCTACC GGGGCGGCCC GGTGCTGTCC
AGCGCGGTGG CGGGCCTGGA CCAGGCGCTG TGGGACATCG CCGGTCAGGT GCGCGGGGCT
CCGGTGCACG AACTGCTGGG CGGTCCGGTC CGCGACCAGG TCCGCGTCTA CGGCTGGATC
GGCGGCGACG ATCCCAGCGA GGTCGGTGAG GCCGCCGCCG CCCAGGCCGA GGCCGGACTC
ACCGCCGTGA AGATGAACGC CTGCGGCAGG CTGCCGCACA TCGCCAGCAA GTCCGAACTG
GACGCGGTCG TCGCGCGCGT CGCCAGCGTC CGGGAGGCGC TGGGCGACGA GCGGGACGTC
GCGATCGACT TCCACGGCCG GGTCTCGGCC GCCGCCGCCC GGCAGCTGTT GCCCCGGCTG
GCGCCGTTGA GCCCGCTGTT CGTCGAGGAA CCCGTCCTGC CCGAGCACCG ACACCTGCTG
TCGTCCATAG TGGCGTGCAG TCCGGTGCCG ATCGCGACCG GCGAGCGCCT CTACCACCGC
TCCGACTTTC TGCCCGCGCT CGAGGCCGGT ATCGCCGTCG CGCAGCCCGA CGTCTCGCAC
GCGGGCGGCA TCTCCGAGCT GCGCCGCATC GCCGCCCTGG CCGAGGTGTG GAACGTCGCG
CTGGCCCCGC ACTGTCCACT GGGGCCGATA TCGCTGGCCG CCAGCCTCCA GGTCGCCTTC
GCCACCCCCA ACTTCCTGAT CCAGGAGCAG AGCCTCGGCA TCCACTACAA CGAGCGCGCC
GACCTGCTGG ACTATCTCGT CGACACCGAG GTGTTCTCGT TCGCCGACGG TCACGTCGCC
CGTCCCACCC GTCCCGGTCT GGGAATCACG ATCGACGAGG CGGCGGTGCG CGCCGCCGCC
GAGCACGGGC ACGCGTGGCG CTCCCCGGTA TGGCGCCACC CCGACGGCTC CTTCGCCGAA
TGGTGA
 
Protein sequence
MKIDRIETFL VPPRWLFCRV ETDEGHVGWG EPVVEGRAAT VRTAVTELGE YLVGRDPLPI 
EDHWQVLTKG GFYRGGPVLS SAVAGLDQAL WDIAGQVRGA PVHELLGGPV RDQVRVYGWI
GGDDPSEVGE AAAAQAEAGL TAVKMNACGR LPHIASKSEL DAVVARVASV REALGDERDV
AIDFHGRVSA AAARQLLPRL APLSPLFVEE PVLPEHRHLL SSIVACSPVP IATGERLYHR
SDFLPALEAG IAVAQPDVSH AGGISELRRI AALAEVWNVA LAPHCPLGPI SLAASLQVAF
ATPNFLIQEQ SLGIHYNERA DLLDYLVDTE VFSFADGHVA RPTRPGLGIT IDEAAVRAAA
EHGHAWRSPV WRHPDGSFAE W