Gene Snas_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0041 
Symbol 
ID8881217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp48601 
End bp50070 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508856 
Protein GI291297578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCT TCCAACAACT ACGCACGGCC AAACTGGACA CTATTCAGGA CCAGGTCGAC 
ACCTGGCAGA ACGTGTCGAC GAAACTGACA TCGCTGCAGA CCACCGCCAC CAACGTCGGC
ACCAAGATCT CGGGCGGGAC CTGGGAGGGC CTCAGCGGTT TCGCCGCCGT CGGCCGTACC
ACCACCCTCA GCGCCGAGCT CAAGGACGCC GCGTCCGAAG TGAACACGGT CAAGGGCCTG
CTCGACTGGT CCAAGGGTCA GTTCGTGGCC CAGAAGAACT CGCTCGACCA GACCGTCACC
GCGGTGAACA ACGACCCGCG ACTGACCATC TCGGACACCG GGCACGTGAA ACCCGACGTC
GAGGCGATCA CCCGCCAGAC CGGCGCCCCA TCGGTCCTGG AACTCCTCGA AGCCCAGAAG
GCCGCCGACA CCCACAACGG CAACATCAAG AAGATCCTGG CCTGGGTGTC CTATGTTGAC
GCACAGTCTT CGGACAAACT GCGGGCCGCC GTCAACCTCG ACTCCCCCAA GGAGCTCGAC
TTCAACGGCG AGGCCGCCAA GGACGCCGAC GCCGTCGACT TCCCCGGCCC CGCCGACCCG
GCGATCGCCG CGGCCCAGTC GGCCGCCTTC GAGAAGACCC TCGGCCGTCC TCCGGTGACC
GAGACCGACT GGAAACTGGC CGCCGCACTG GACCCCACGT CCCGGCTCGA CAAGAACGGC
GGCAAGGACG CGGTCGTGGC CGTCGGCCGC ATCACGCCGC GACCGGGCGA GGGCCTGGTG
CGCATCGGTC TGTACATCCC CAGCAAAGAG GTGTTCAACC TCCCCAACTA CGACCTCGGT
GACAACCGGG GCATGGACCC GAACTTCAAC CCGGAGGACG CCCGGGTGAC GTTGTACGTC
GACTACGAGA CCGGAACCGT TCTGGCGCGC CAGAACCCGT CGGTCGACAC CAGCGGCGAA
GTCCGCGTCG CCACCCCGTC GGTGCAGGTA CAGGAGTCCA CCAACGGCGC GGTGCGGATC
CAGTACGACG CGTCCAACCC GTTCGCGCCA CCCGGCAGTG ACCAGACCGG ACACACCGTC
AAGGGCGACA TCACGGTCTC CCCGGGACAG CCACCCCGCG TCGACGGCGC CATCGGCGAC
TACCCGGCCT TCGAGGCGTA CCACGACTCC AACAACGGTC CCACCACAAC GCTCGTCCAG
GACCGCGCCG ACAACGAGGG CAACTTCGGC CCACTGCTGG AACTGCCCAC CGACCACGAG
ATCGGCGCCG GACGCGGCGG CCCACCGGCT CAGTTCAAGG AGTGGCGCCA CCTCTCCGGC
GACGACTGGA TAGCGCACGG CGAGGCCCCG AGCACCAACC TCGGCGACCC CGGCAACCCA
CCGACCGTCA CGCCGTACAA GCCCTACGGC GGGTCAGAGT TCCACCCCAA CGCCCCCGGA
GTCCCACCCA CCGAAGGCGA GTTCGTCTGA
 
Protein sequence
MVTFQQLRTA KLDTIQDQVD TWQNVSTKLT SLQTTATNVG TKISGGTWEG LSGFAAVGRT 
TTLSAELKDA ASEVNTVKGL LDWSKGQFVA QKNSLDQTVT AVNNDPRLTI SDTGHVKPDV
EAITRQTGAP SVLELLEAQK AADTHNGNIK KILAWVSYVD AQSSDKLRAA VNLDSPKELD
FNGEAAKDAD AVDFPGPADP AIAAAQSAAF EKTLGRPPVT ETDWKLAAAL DPTSRLDKNG
GKDAVVAVGR ITPRPGEGLV RIGLYIPSKE VFNLPNYDLG DNRGMDPNFN PEDARVTLYV
DYETGTVLAR QNPSVDTSGE VRVATPSVQV QESTNGAVRI QYDASNPFAP PGSDQTGHTV
KGDITVSPGQ PPRVDGAIGD YPAFEAYHDS NNGPTTTLVQ DRADNEGNFG PLLELPTDHE
IGAGRGGPPA QFKEWRHLSG DDWIAHGEAP STNLGDPGNP PTVTPYKPYG GSEFHPNAPG
VPPTEGEFV