Gene Snas_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0032 
Symbol 
ID8881208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp40179 
End bp42224 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508847 
Protein GI291297569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CGCCCCGCCG ATGGTGGGCG TTGAGCGTGG TCATCGCCGT CGTCGCGGGA 
CTCGCGACGG CGGCGTACGC GATCGTCACC GGCGGCATCG ATCTCAGCGG ACGCGGCGAA
CCCGAGGACT GCGAGTACAA CGCGTTCGAC GCGCCGATGC GGATCACGGG CATGAGCCCC
AACGGAAAGT ACATCGTCGG GATCCCCACG GACATGGACT CCGACACCAC CTTCGGTGTG
TGGCACGACG GCGAGTACTT CGAGACAACG GTGGCCGCCG ACAGGTACTC CGAACTGCTC
GACATCAACG ATTCCGGCGA CGTGCTGGGG TATTCCACCG TCGACTCGGT CATCTGGCGT
CACATCGACG GCGAGTTCCA GTACCTCAAG GCACCGGACG GCTCCTCGGA GGTGATACCC
GAGGCGATCG GAGCCGACGG CACCGTCGTC GGCAGCACGA GCGACGAAAC CGCTCCGCGA
CCGGTGAAGT GGAGCCCTGG TTCTGTCAAG GCCACCGAGC TGGACCTCGA CGGCCATGAC
CGCGGGACGG CCGTCGACAT CACCGAGAAC GGCACCATCG TCGGCCACGT CGGCGACGGC
GATACCGCCA CCGACGCGTG GCGGTGGGAC GCGGACGGTA AGGGGCGCAA GATCTTCGGC
ATCAAGACGA TCCCCGGCCT GCCCGGGGTC GATGTCGCGG GGGACTCCGA GGCCGTGTCC
GTCACCGGCG ACTGGGTGCT GTTCACCGCC GGTGCCAGCC AGTATCGCGC GCACCTCGAC
GATCCCGACA GGCCGCAGAA GCTCAAGGTG CGTCTGGCCT TTCTGGACGA ATACGGCCGG
GCATACGGTT CCAAGAAGGG CGATCCAGCG GTGTACGACG AGAAGGTCAC CAAACTGCCG
GGCCTGACCG CCCCGCCGGA GCCCGCCGAG GACGATCCGG ACGAGTTGTT CAACGAGATC
CTGGCCGTGT CCGGCGACGG TGGTCGCATC GCCGGACGCA CCTGGGACGA CAAGGAAGTC
CTGTGGATCT GCGACGGGTC CCGCCTTCCC AAGACCGTCA AGGCGTCCGC GCCCGACTCC
GAAGCGGACG GTCCGTCGAA GGAGCCGAAA GCCTGTGAGG TGAAGGCGCT GACCACCCTC
GAAGGCAAGG ACTTCGCGAC CGAGACCCAT GTCAGCCCCG ACGGTGCCTA CGCCGCGATC
GGGATCGCGT ACTTCGAGGA GGAGAAGTCC GACTCGTTCG GATTGTGGCA CGACGGCGAG
TACACCGAGG TGGACGGCGT TCCCCGGCTC GGCAACGTGA ACGTGTACGG GGTCAACAGT
TCGGGGACGG TCATCGGCGA GAGCAGCACG ACCGGCGATG GCGAGGACCG GTCCACTTAC
TGGCGGTACC AGGGCGGGAA AGTCCAGACC CTCGACATGC CAGCGGGTGC CGCATCCAGT
CGCCCCAGCG CGATCGGCGA GGACGGCACC GTCGTCGGCA CTTTCCAGGA TTTGGAGAGC
CGCTCGGGTC CGGTGATGTG GAAACCGGGG CGGTCAACGC CGACGAAACT GGACAACGGC
GGGCACCACG AGGGTGAGGC CTCGGACGTT TCCGAATCCG GCGTCATCGT GGGCTCGCTC
CCGGAGAAGA AGGACTACGC CGGCAAGGCA TGGATGTGGG ACAAGGACGG CAAGGCCACC
CAGCTGCCGG ATGTGGGCAC AAAGGACGAT TACAGCGCCG CCGTCGCCAT CGCGGGTGAC
TGGGTGCTGT TGACCACCCA GGACAACGGA AACTACACCC ACTATCGGTA CAACCTCAAG
GACAAGGGCG AACCCGAGAA GGTGAAACTC ACCGAGGCCA ACGACATCGA CGCCAAGGGC
CGGGTGTACG GAACCAACGG ATCGTCGCTG GCGGTGTACG ACGGCGCCTT CAACGAACAG
CCTGGGCTCG ACGATGGTTC CGGCGAGGCC CCCGTGACGG ACGACCAGAT CAACTCGGCC
TCGACCGACG GTTCGACCTT CGCGGGCGTC TCCGCCGACG AACCCGCGCT GTGGACCTGC
GACTAG
 
Protein sequence
MTRPPRRWWA LSVVIAVVAG LATAAYAIVT GGIDLSGRGE PEDCEYNAFD APMRITGMSP 
NGKYIVGIPT DMDSDTTFGV WHDGEYFETT VAADRYSELL DINDSGDVLG YSTVDSVIWR
HIDGEFQYLK APDGSSEVIP EAIGADGTVV GSTSDETAPR PVKWSPGSVK ATELDLDGHD
RGTAVDITEN GTIVGHVGDG DTATDAWRWD ADGKGRKIFG IKTIPGLPGV DVAGDSEAVS
VTGDWVLFTA GASQYRAHLD DPDRPQKLKV RLAFLDEYGR AYGSKKGDPA VYDEKVTKLP
GLTAPPEPAE DDPDELFNEI LAVSGDGGRI AGRTWDDKEV LWICDGSRLP KTVKASAPDS
EADGPSKEPK ACEVKALTTL EGKDFATETH VSPDGAYAAI GIAYFEEEKS DSFGLWHDGE
YTEVDGVPRL GNVNVYGVNS SGTVIGESST TGDGEDRSTY WRYQGGKVQT LDMPAGAASS
RPSAIGEDGT VVGTFQDLES RSGPVMWKPG RSTPTKLDNG GHHEGEASDV SESGVIVGSL
PEKKDYAGKA WMWDKDGKAT QLPDVGTKDD YSAAVAIAGD WVLLTTQDNG NYTHYRYNLK
DKGEPEKVKL TEANDIDAKG RVYGTNGSSL AVYDGAFNEQ PGLDDGSGEA PVTDDQINSA
STDGSTFAGV SADEPALWTC D