| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0022 |
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| Symbol | |
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| ID | 8881196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 26946 |
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| End bp | 28607 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | TrkA-N domain-containing protein |
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| Protein accession | YP_003508837 |
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| Protein GI | 291297559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.377987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCC GGTTGGTTGA GGAGCTGGTC TTTCGGCACC GCGAGAACGT CACGGTGATC
CTGCCGTCGC GGCGGCGAAA CCACGGCCCG CAGATCTCCC GGGTGCCGAC GGTACGGGTG
GTGGAGAACG ACCAACTGGA CGCGGACGCC TTCTCCTCGG CGCGGATCAC GCAGGCCAAG
GCGCTGGCGC TGATGGCCCA GGACGACGTC GGCAACATCC ACGCCGCGCT GCGGGCGCTG
GAGATCACCG AGATCCGGGT GGTGGTGCGG TGTTTCAATA CCAACCTGGG CAACCGGATC
GAACCGCTGC TGGGTGACTG CACCCTGCTG TCGGACGCGT CCATGGCCTC GCCGTCCTTC
GTGGCCGCGG CCCTGGGCGA GGTCGCGCCC AGGTATTCGC AGGTGCTGGG GCGGACCCTG
TACGTTACGG CCTCGGCCAG CGACCGGGGT GACCGGCTGA CCTGGCCGAT CGCGGGCGGC
CCGGACGAGG GGGTGCTGCT TCCCGGCGAG GAGGTGGAAC CCTCGCTTTT CGTCACCGTC
GCCACCCGAA GACCCCGGCG GGCCCTGGTC ACGGCCTCCA AACACCGGGT GCGCAGTCTC
GCCACCCGGC TGTGGGACGA ACTGCGCGAA ATCCTGGACC GCAAGCTGCG CTTCATCACG
CTGTTCCTGG TGGCGGTGAT CGTACTGGGA AGTTTCCTGA TCTGGAACTC CCACAAGGGC
GACGGCCAGT CCTTCGGCTG GCTGGAGTCG GCCTACGTCG TCATCCTGGC CGCCGCCGGG
GGCATCGACC CGGTGACGGG GGCCGAGTTC GCCGAGAAGT TCGCCCACGT CCTGGTCGCG
ATATCCGGGG TGCTGCTGGT CCCGATCTTC ACCGCGTCCA TCGTGGAGAA CATGGTCGGC
CGCAGGCTGG CCGCCGAGGC GGGCCGGTTG CGCGGACCGA TCAGCGACCA CGTCATCGTG
GTGGGACTGG GCAATGTCGG CACTCGCATC GCCGTCCAGC TGCGGAACCT GGGCGTGCCG
GTGGTGGCCA TCGAGCGCAA CGCCCGCTGC CACGGTGTCG ACGTGGCGCG CAGCCAGGAC
ATCCCGGTCG TCTACGGTGA CGCCAGCCAG CTGGAGACGC TGCACGCGGC GCAGGTGCGG
ACCTGCCGGT CGCTGGTCGC GGTCACCAGC AACGACATCG TGAACCTGGA GGCGGCGCTG
CACGCGCGCA GCATCCGGCA GGACCTGCGC ACCGTGCTGC GACTGTTCGA ACAGGACCTG
GCCGAGCGGG TGCAGAAGCA CTTCGACATC TCGGCCTCGC TGAGCGTCGC CGGGGTGGCG
GCGGCCGAGT TCGCCGCCGC CATGACCGAC CGCAACGTCA AGGGCACCAT CCCGGTGGGG
CGGCACCTGG TGCTGATCGG CGAGTTCACC GTCGAGGACG GTTCGGAGCT GGCGGGCCAG
CCGCTGTCCC AGATCGACGC GGACGAGAGC CTGCGGGTGC TCGCCATATC CAAGGTGGAC
GAAACCGACT GGGCGCCGGA TCCGCAGCGG CTCATGGATC CCGGCGACAC CGTGCTGGTC
CTGGCCACCC GGCGCGGCCT GGCCGCCACC GTCCGGCGCG CCGCCCCCTC GACCGGACCG
GAGGAGCCGA GGCTCGGCCA GCCGTCGCCA TTTCGTCCCT GA
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| Protein sequence | MAFRLVEELV FRHRENVTVI LPSRRRNHGP QISRVPTVRV VENDQLDADA FSSARITQAK
ALALMAQDDV GNIHAALRAL EITEIRVVVR CFNTNLGNRI EPLLGDCTLL SDASMASPSF
VAAALGEVAP RYSQVLGRTL YVTASASDRG DRLTWPIAGG PDEGVLLPGE EVEPSLFVTV
ATRRPRRALV TASKHRVRSL ATRLWDELRE ILDRKLRFIT LFLVAVIVLG SFLIWNSHKG
DGQSFGWLES AYVVILAAAG GIDPVTGAEF AEKFAHVLVA ISGVLLVPIF TASIVENMVG
RRLAAEAGRL RGPISDHVIV VGLGNVGTRI AVQLRNLGVP VVAIERNARC HGVDVARSQD
IPVVYGDASQ LETLHAAQVR TCRSLVAVTS NDIVNLEAAL HARSIRQDLR TVLRLFEQDL
AERVQKHFDI SASLSVAGVA AAEFAAAMTD RNVKGTIPVG RHLVLIGEFT VEDGSELAGQ
PLSQIDADES LRVLAISKVD ETDWAPDPQR LMDPGDTVLV LATRRGLAAT VRRAAPSTGP
EEPRLGQPSP FRP
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