Gene Snas_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0019 
Symbol 
ID8881193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp23187 
End bp24437 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003508834 
Protein GI291297556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC TGAACTCAAC CGAAATCAAG ACCGACAACG ACTCCGGCTT CTCCGACGCG 
GGGCTGCGCC GACTGCGGGG CGTGCTGGAA CGGCACGTCG ACTCGGGGAA GATCCCCGGC
CTGGTCGCGC TGGTCAGCCG CGACGGACAC ACGCACGTCG AGACGCTCGG CACGATGCGC
CACGACGGCG GTGCGCCGAT GCGCCGCGAC ACGATCTTTA GGGTGGCGTC CATCGCCAAG
CCGGTCACGA TGGCGGCGGC GATGATCCTG CTCGACGAGT GCCGGATGCG GCTGGACGAG
CCGGTCGACG AGTGGCTGCC CGAGCTGGCG AACCGCCGGG TGCTCAAGCG GCCCGACGGC
CCGCTGGACG AGACCGTTCC GGCGAACCGG CCGATCACCG TCCGGGACGT GCTCACCTGC
ACCTTCGGGC TCGGCGTCGA CTTCGAGCTG ATGACCGCCC CGATCCGGGC CGCGATCTTC
GAGGCGACCG ACTACGGCGT GGGCTCGGGA CCGGCGCCCG GCTTCGACGA GTGGATGCGC
CGTCTCGGTG AGCTGCCGCT GTCGTACCAG CCCGGCGAAC GCTGGCAGTA CGACCTCCCC
AGCGAGGTGG CCTGCGTGCT CGTGTCCCGG GTCGCCGGAC AGCCCTTCGG CCAGTTCCTG
CGCGAACGCG TCCTCGAACC CCTGGGGATG AAGGACACCG GGCACCACGT GCCCGACGGC
GAGATCCACC GGCTGCCGCC GCTGTACGGG CCCGACCCGC AGACCGGGGA GTTCCTCGTG
TGGGACGAGG CCGAGGGCGG GCGGGTCAGC CAGGCCCCCG AGTTCGAGGG CACCGCGCTG
GTGTCGACCG TCGACGACTA CCACGCCTTC TTCCGGATGC TGCTCAACGG CGGGACGCAC
CAGGGGCGAC GCATCCTGTC CCGTCCCGCG GTTGAGCTGA TGACCACGAA CCGGCTCACG
CCTGAGATGA ATTCCGCCCG CGACGACATG TACCGCGCGA TCCTGCACCT GTCGAACGGC
CAGGGGCTGC ACGGCGGCTG GGGGCTGGGG ATGGCGGTGC GCACCCGCCG CGGCGACTAC
GCGCCGGTGG GCCAGTTCGG CTGGGACGGC GGCACCGGCA CCAGCGTCTA CGCCGACCCG
CACCACCGGC TCACCGGCAT GCTGTTCACC CAGGTCGGCA TGTCCACCCT GGATTCGGTG
CGTCTCATCC AGGACTTCTG GACCACGACC TACCAGGCGA TCGACGCCTG A
 
Protein sequence
MTNLNSTEIK TDNDSGFSDA GLRRLRGVLE RHVDSGKIPG LVALVSRDGH THVETLGTMR 
HDGGAPMRRD TIFRVASIAK PVTMAAAMIL LDECRMRLDE PVDEWLPELA NRRVLKRPDG
PLDETVPANR PITVRDVLTC TFGLGVDFEL MTAPIRAAIF EATDYGVGSG PAPGFDEWMR
RLGELPLSYQ PGERWQYDLP SEVACVLVSR VAGQPFGQFL RERVLEPLGM KDTGHHVPDG
EIHRLPPLYG PDPQTGEFLV WDEAEGGRVS QAPEFEGTAL VSTVDDYHAF FRMLLNGGTH
QGRRILSRPA VELMTTNRLT PEMNSARDDM YRAILHLSNG QGLHGGWGLG MAVRTRRGDY
APVGQFGWDG GTGTSVYADP HHRLTGMLFT QVGMSTLDSV RLIQDFWTTT YQAIDA