Gene Snas_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0017 
Symbol 
ID8881191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp21366 
End bp22034 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003508832 
Protein GI291297554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA TAGGTGAACT GAGCAACCGC TCGAACGTCC CGGTCGCGAC GATCAAGTTC 
TACGTCCGCG AGGGACTGCT GCCGTCCGGC CAGCGCGCCA AGGCCAACCA GGTCTCCTAC
GACGAGTCCC ACCTGCGACG GCTACGACTC ATCCGGGCCC TGGTCGACGT CGGGAAACTG
TCGATCGCGA CCGCCCGCCG CGTACTGGCC ATACTGGACG ATCCCAGCAC CTCGGCGTTC
ACCGGCATGG GCAAGGCCCA GTACGCGCTG TCCGGCCACC CCGACCTCGA CCCCGACACC
CCACCGCCCC CGGCCGCCGC CCCCGAGGAC CTGGCCGAGG TCGACGATCT GCTCGCCCGC
CACGGCTGGT CGATACGCCC CGGCAACCCG GCCCGCGCCC AACTCGCGAC CGCCATGGCC
ACGGCCCGGG CACTCGGTCT GGCCGACGGC CTGGAGCTGT TGGACACCTA CGCCGACGCG
GCCCAAACCG TCGCCGAGGC TGACGTCGGG CTCGTGGTGT CACCGCAAGC GGAACAGGGG
ACGTCGCCGG AGGCCACGAC GCTGGAGGAA TCGATCGAGC GCATGCTGGT GTGGACCGTC
GTCGGCGGCC AGGCTCTGGC AGCGCTGCGG CTGCTGGCCC AGGAGGCCAC GGCGACGAAA
CGCCTGTGA
 
Protein sequence
MMRIGELSNR SNVPVATIKF YVREGLLPSG QRAKANQVSY DESHLRRLRL IRALVDVGKL 
SIATARRVLA ILDDPSTSAF TGMGKAQYAL SGHPDLDPDT PPPPAAAPED LAEVDDLLAR
HGWSIRPGNP ARAQLATAMA TARALGLADG LELLDTYADA AQTVAEADVG LVVSPQAEQG
TSPEATTLEE SIERMLVWTV VGGQALAALR LLAQEATATK RL