| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0011 |
|---|
| Symbol | |
|---|
| ID | 8881185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 12924 |
|---|
| End bp | 14750 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003508827 |
|---|
| Protein GI | 291297549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTC GACTCGGCGA CCTCGCCGAC CCATTCCTGC CCGACCCGCC CCACAACCCG
CCCACCCGCG TCTGGCCGTT CCTGAAACTC CAGCTGCGCC CGCTGCGGCA CATCATCACC
GCCTCACTGC TGTTCTCGGC CGCCAGCGCG GCCGTCGAGG TGTGGCTGAT CTTCTACACC
GGACAACTCG TCGACACCCT CGCCGCGACC ACCCCGGCCC GGCTGTGGGC CGAACACGGT
CTCGAACTGG TACTCGTCGC CGCACTGTTC CTGATCCTGC GTCCCCTGCT GTGGACCGGT
CGCGAAAGCC TGGACGACAT CGCCTTCCGC CCCAACGCCG CCACCGGAAC CCGCTGGCGC
CTGCACCGCC ACGTCCTCGG CCAGTCGGTC GGCTGGTTCC GCAAGGACCT CGCCGGACGC
ATCGCCTCAC GAGTCACCGA ACTCACCACC GCCGCAACCG GCGCCGCCTA CACGGTGCTG
CACACCCTGT CCTTCGTCGG CATGTACATC GTCGGCTCGT TCTGGCTCAT GTCCGCACAG
GACATCCGAC TCGCGATCCC GCTGGCGCTG TGGATCGGGC TCTACTTCGC CGTGATGGCC
TATGTGGTGC CCCGCTACCG CCGGGCCTCC CAACGCCACC AGTCCACCCA GTCGGCCCTG
ACCGGTCTGC TGGTCGACAC TTACGCCAAC ATCGACACCA TCAAGATGTC GGCGACCGGA
ACCGACGACC CCGAAAGCCG CCGCCGCTTC GCCGACAACC ACACCGCTCA CCTACGGCTG
CAACGCGTCG AGGTCACGAT CAACGCGAGC ATGATGGCGC TGGGAACCAT CCTCACCGTC
GGCCTCGTCG GCTACTCGAT CGCACTGTGG CAGACCGGGG CCGCCCCGCT GGGACTCGTC
GCCGCCTCCC TGGCACTGAG CCTGCGCGTC AACGGCATCG CCGAGTGGCT GCTCGACGCG
GTCACCGCCC TGTTCGGCTG CCTCGGCGCG ATGCGCGAAC ACCTCCCCAC CATCGCCCAA
CCCCTGGAGA TAACCGACGC CCCCACCGCC ACCGACCTGA CGATCACCGG CGGAGCCATC
CGCCTCCACG ACGTCAGTCA CCACTACGGC AAGGAAACCG GCGGCCTGGA CCGCGTCTGC
CTCAACATCC CCGCCGGCCA GAAGATCGGC CTCGTCGGCC GCTCCGGGGC CGGTAAGTCA
ACCCTGGTCA ACCTGATCCT CCGGTTCTTC GACGCCGAAT CCGGAACCAT CACGATCGAC
GACCAGAACA TCCGCGCCGT CACCCAGGAC AGCCTGCGCC ACCACATCGC CCTGGTGAGC
CAGGACGCCT CCCTGCTCCA CCGCTCGGTG GCCGCCAACA TCACCGGCGG CGTCGACAAC
ATCGACCGAA CCCGAATAAC CGAGGCGGCC CGCAAAGCGG CGGCCGACGG CTTCATCCCC
ACCCTGCGCG ACGCCACCGG CCGCACCGGC TACGACGCCC ACGTCGGCGA ACGCGGCGTC
ACCCTCTCGG GCGGCCAACG CCAACGCATC GCCCTGGCCC GGGCCTTCCT CACCGAAGCC
CCGATCCTGG TCCTCGACGA GGCCACCTCA GCGCTCGACT CCGAATCCGA AGCGGCCATC
CAGGAAACCC TCTCGGAGAT CATGGCGGAC AAGACGGTCA TCGCGATCGC CCACCGCCTG
TCCACCATCG CCCACCTTGA CCGCATCGTC GTCCTCGACG AGGGCCGCAT AGTCGAAGAC
GGCAGCCACG ACCAACTACT GACCACTGGC GGCATCTACG CCGACTTGTG GAAACACCAA
TCCGGAGGCT TCCTCAGTTC CACGTGA
|
|---|
| Protein sequence | MFRRLGDLAD PFLPDPPHNP PTRVWPFLKL QLRPLRHIIT ASLLFSAASA AVEVWLIFYT
GQLVDTLAAT TPARLWAEHG LELVLVAALF LILRPLLWTG RESLDDIAFR PNAATGTRWR
LHRHVLGQSV GWFRKDLAGR IASRVTELTT AATGAAYTVL HTLSFVGMYI VGSFWLMSAQ
DIRLAIPLAL WIGLYFAVMA YVVPRYRRAS QRHQSTQSAL TGLLVDTYAN IDTIKMSATG
TDDPESRRRF ADNHTAHLRL QRVEVTINAS MMALGTILTV GLVGYSIALW QTGAAPLGLV
AASLALSLRV NGIAEWLLDA VTALFGCLGA MREHLPTIAQ PLEITDAPTA TDLTITGGAI
RLHDVSHHYG KETGGLDRVC LNIPAGQKIG LVGRSGAGKS TLVNLILRFF DAESGTITID
DQNIRAVTQD SLRHHIALVS QDASLLHRSV AANITGGVDN IDRTRITEAA RKAAADGFIP
TLRDATGRTG YDAHVGERGV TLSGGQRQRI ALARAFLTEA PILVLDEATS ALDSESEAAI
QETLSEIMAD KTVIAIAHRL STIAHLDRIV VLDEGRIVED GSHDQLLTTG GIYADLWKHQ
SGGFLSST
|
|---|
| |