Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0006 |
Symbol | |
ID | 8881179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6164 |
End bp | 8134 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | DNA gyrase B subunit |
Protein accession | YP_003508822 |
Protein GI | 291297544 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.381905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGCGG CGGAAAAGAA GCAGGATGAC TACAACGCCG GGTCGCTTAC CGTCCTCGAG GGTCTCGAGG CGGTTCGCAA ACGACCCGGC ATGTACATCG GCTCGACGGG GGAACGCGGC CTCCATCACC TGATCTGGGA AGTCGTCGAC AACGCGGTCG ACGAGGCAAT GGCGGGACAC TGCGACACGA TCGACGTCAC CATCCTGGCC GACAACGGGG TCCGTGTCAT CGACAACGGT CGTGGCTTCC CGGTCGACCT GCACCCCAAA CTCAAGAAGC CCGGCGTCGA GGTCGCGCTG ACCGTGCTGC ACGCGGGCGG CAAGTTCGAC TCCAAGTCCT ACGCGGTCTC CGGTGGTCTG CACGGCGTCG GCATCTCGGT GGTGAACGCG CTGTCGACCC GCATCGAGAT GGAGATCCAG CGCGACGGTT TCGTCTGGAC GCAGTCGTAC AAGCACTCGG TGCCCGGTCC GCTGGAGCAG GGCGAGAAGT CGCGCAAGAC CGGAACCTCG GTGAGCTTCT GGCCGGACGA CACCATCTTC GAGACCACCG TCTACAACTT CGAGACCATC TACCGGCGGT TGCAGGAATA CGCGTTCCTC AACAAGAACC TCAAGATCGT GCTGCGCGAC GAACGGCCGC GACCGGAGTC CGAGGAGGAC ACCAAACCGC GCGAGGTGGT GTTCCAGTAC GCCGAGGGCA TCGCCGACTT CGTCCGGCAC CTCAACGCCA CCAAGTCGCC GCTGCACAAG TCGGTCGTCA TGTTCGAGGC GAAGTCCGAG GAGGACGGCT CGAGCCTCGA GGTCGCGATG CAGTGGAACG AGTCCTACGG CGAGAGCGTC TACACCTTCG CCAACGCCAT CAACACCCAC GAGGGCGGCA CCCACGAAGA GGGCTTCCGG GCCGCGCTGA CCACCTGCGT CAACAAGTAC GGCACCGACC GCAAGCTGCT CAAGGGCACC GACCGGCTGT CGGGCGACGA CATCCGCGAG GGACTGGCCG CGATCGTGTC GGTGAAACTC GTCGAGCCGC AGTTCGAGGG CCAGACCAAG ACCAAACTGG GCAACACCGA GGTCAAGAGC TTCGTGCAGC GGGTCTGCAA CGAGTGGCTG GTCGACTGGT TCGACCGCAA CCCGTCCGAG GCCAAGACGA TCATCACCAA GGCCTCGGCC GCCGCCCAGG CCCGCAAGGC CGCCGCCCAG GCCCGCAAGC TGGCCCGCCG CAAGTCGCTG CTGGAGACCT CCTCCATGCC GGGCAAGCTG GCCGACTGCC AGTCCACCGA CCCGAGCGAG TCGGAGATGT TCGTCGTCGA GGGTGACTCG GCCGGTGGTT CCGCCAAACA GGGCCGCGAC CCGCGCACCC AGGCCATCCT GCCGATCCGG GGCAAGATCC TCAACGTCGA GAAGGCCCGC ATCGACAAGA TCCTCAAGAA CAACGAGGTC CAGGCGATGA TCACGGCACT GGGCACCGGC ATCCACGACG ACTTCGACAT CGAGAAACTG CGCTACCACA AGATCATCCT GATGTCGGAC GCCGATGTGG ACGGTCAGCA CATCAACACG CTGCTGCTGA CGTTGCTGTT CCGGATGATG CGCCCGCTGG TGGAGATGGG CCACGTCTAC ATGTCGCAGC CGCCGCTGTA CAAGATCAAG TGGAACCGCA AGGGCGACCA GGTCGAGTAC GCCTTCTCCG ACCGGGAACG CGACGGTCTC ATCGAGATGG GCATGTCGCA GGGCAAGCCG GACCCGCGCA AGTACGACGG CATCCAGCGC TACAAGGGTC TGGGCGAGAT GAACTACACC GAGCTGTGGG AGACCACGAT GAACCCGGCC ACCCGGGCGC TGCTCCAGGT CACGCTCGAC GACGCCGCCA CCGCCGACGA ACTGTTCAGC GTCCTGATGG GCGAGGACGT CGAGACCCGG CGCAACTTCA TCCAGCGCAA CGCCAAGGAC GTCCGCTTTC TTGATATTTA G
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Protein sequence | MAAAEKKQDD YNAGSLTVLE GLEAVRKRPG MYIGSTGERG LHHLIWEVVD NAVDEAMAGH CDTIDVTILA DNGVRVIDNG RGFPVDLHPK LKKPGVEVAL TVLHAGGKFD SKSYAVSGGL HGVGISVVNA LSTRIEMEIQ RDGFVWTQSY KHSVPGPLEQ GEKSRKTGTS VSFWPDDTIF ETTVYNFETI YRRLQEYAFL NKNLKIVLRD ERPRPESEED TKPREVVFQY AEGIADFVRH LNATKSPLHK SVVMFEAKSE EDGSSLEVAM QWNESYGESV YTFANAINTH EGGTHEEGFR AALTTCVNKY GTDRKLLKGT DRLSGDDIRE GLAAIVSVKL VEPQFEGQTK TKLGNTEVKS FVQRVCNEWL VDWFDRNPSE AKTIITKASA AAQARKAAAQ ARKLARRKSL LETSSMPGKL ADCQSTDPSE SEMFVVEGDS AGGSAKQGRD PRTQAILPIR GKILNVEKAR IDKILKNNEV QAMITALGTG IHDDFDIEKL RYHKIILMSD ADVDGQHINT LLLTLLFRMM RPLVEMGHVY MSQPPLYKIK WNRKGDQVEY AFSDRERDGL IEMGMSQGKP DPRKYDGIQR YKGLGEMNYT ELWETTMNPA TRALLQVTLD DAATADELFS VLMGEDVETR RNFIQRNAKD VRFLDI
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