Gene Snas_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0006 
Symbol 
ID8881179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6164 
End bp8134 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content65% 
IMG OID 
ProductDNA gyrase B subunit 
Protein accessionYP_003508822 
Protein GI291297544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.381905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCGG CGGAAAAGAA GCAGGATGAC TACAACGCCG GGTCGCTTAC CGTCCTCGAG 
GGTCTCGAGG CGGTTCGCAA ACGACCCGGC ATGTACATCG GCTCGACGGG GGAACGCGGC
CTCCATCACC TGATCTGGGA AGTCGTCGAC AACGCGGTCG ACGAGGCAAT GGCGGGACAC
TGCGACACGA TCGACGTCAC CATCCTGGCC GACAACGGGG TCCGTGTCAT CGACAACGGT
CGTGGCTTCC CGGTCGACCT GCACCCCAAA CTCAAGAAGC CCGGCGTCGA GGTCGCGCTG
ACCGTGCTGC ACGCGGGCGG CAAGTTCGAC TCCAAGTCCT ACGCGGTCTC CGGTGGTCTG
CACGGCGTCG GCATCTCGGT GGTGAACGCG CTGTCGACCC GCATCGAGAT GGAGATCCAG
CGCGACGGTT TCGTCTGGAC GCAGTCGTAC AAGCACTCGG TGCCCGGTCC GCTGGAGCAG
GGCGAGAAGT CGCGCAAGAC CGGAACCTCG GTGAGCTTCT GGCCGGACGA CACCATCTTC
GAGACCACCG TCTACAACTT CGAGACCATC TACCGGCGGT TGCAGGAATA CGCGTTCCTC
AACAAGAACC TCAAGATCGT GCTGCGCGAC GAACGGCCGC GACCGGAGTC CGAGGAGGAC
ACCAAACCGC GCGAGGTGGT GTTCCAGTAC GCCGAGGGCA TCGCCGACTT CGTCCGGCAC
CTCAACGCCA CCAAGTCGCC GCTGCACAAG TCGGTCGTCA TGTTCGAGGC GAAGTCCGAG
GAGGACGGCT CGAGCCTCGA GGTCGCGATG CAGTGGAACG AGTCCTACGG CGAGAGCGTC
TACACCTTCG CCAACGCCAT CAACACCCAC GAGGGCGGCA CCCACGAAGA GGGCTTCCGG
GCCGCGCTGA CCACCTGCGT CAACAAGTAC GGCACCGACC GCAAGCTGCT CAAGGGCACC
GACCGGCTGT CGGGCGACGA CATCCGCGAG GGACTGGCCG CGATCGTGTC GGTGAAACTC
GTCGAGCCGC AGTTCGAGGG CCAGACCAAG ACCAAACTGG GCAACACCGA GGTCAAGAGC
TTCGTGCAGC GGGTCTGCAA CGAGTGGCTG GTCGACTGGT TCGACCGCAA CCCGTCCGAG
GCCAAGACGA TCATCACCAA GGCCTCGGCC GCCGCCCAGG CCCGCAAGGC CGCCGCCCAG
GCCCGCAAGC TGGCCCGCCG CAAGTCGCTG CTGGAGACCT CCTCCATGCC GGGCAAGCTG
GCCGACTGCC AGTCCACCGA CCCGAGCGAG TCGGAGATGT TCGTCGTCGA GGGTGACTCG
GCCGGTGGTT CCGCCAAACA GGGCCGCGAC CCGCGCACCC AGGCCATCCT GCCGATCCGG
GGCAAGATCC TCAACGTCGA GAAGGCCCGC ATCGACAAGA TCCTCAAGAA CAACGAGGTC
CAGGCGATGA TCACGGCACT GGGCACCGGC ATCCACGACG ACTTCGACAT CGAGAAACTG
CGCTACCACA AGATCATCCT GATGTCGGAC GCCGATGTGG ACGGTCAGCA CATCAACACG
CTGCTGCTGA CGTTGCTGTT CCGGATGATG CGCCCGCTGG TGGAGATGGG CCACGTCTAC
ATGTCGCAGC CGCCGCTGTA CAAGATCAAG TGGAACCGCA AGGGCGACCA GGTCGAGTAC
GCCTTCTCCG ACCGGGAACG CGACGGTCTC ATCGAGATGG GCATGTCGCA GGGCAAGCCG
GACCCGCGCA AGTACGACGG CATCCAGCGC TACAAGGGTC TGGGCGAGAT GAACTACACC
GAGCTGTGGG AGACCACGAT GAACCCGGCC ACCCGGGCGC TGCTCCAGGT CACGCTCGAC
GACGCCGCCA CCGCCGACGA ACTGTTCAGC GTCCTGATGG GCGAGGACGT CGAGACCCGG
CGCAACTTCA TCCAGCGCAA CGCCAAGGAC GTCCGCTTTC TTGATATTTA G
 
Protein sequence
MAAAEKKQDD YNAGSLTVLE GLEAVRKRPG MYIGSTGERG LHHLIWEVVD NAVDEAMAGH 
CDTIDVTILA DNGVRVIDNG RGFPVDLHPK LKKPGVEVAL TVLHAGGKFD SKSYAVSGGL
HGVGISVVNA LSTRIEMEIQ RDGFVWTQSY KHSVPGPLEQ GEKSRKTGTS VSFWPDDTIF
ETTVYNFETI YRRLQEYAFL NKNLKIVLRD ERPRPESEED TKPREVVFQY AEGIADFVRH
LNATKSPLHK SVVMFEAKSE EDGSSLEVAM QWNESYGESV YTFANAINTH EGGTHEEGFR
AALTTCVNKY GTDRKLLKGT DRLSGDDIRE GLAAIVSVKL VEPQFEGQTK TKLGNTEVKS
FVQRVCNEWL VDWFDRNPSE AKTIITKASA AAQARKAAAQ ARKLARRKSL LETSSMPGKL
ADCQSTDPSE SEMFVVEGDS AGGSAKQGRD PRTQAILPIR GKILNVEKAR IDKILKNNEV
QAMITALGTG IHDDFDIEKL RYHKIILMSD ADVDGQHINT LLLTLLFRMM RPLVEMGHVY
MSQPPLYKIK WNRKGDQVEY AFSDRERDGL IEMGMSQGKP DPRKYDGIQR YKGLGEMNYT
ELWETTMNPA TRALLQVTLD DAATADELFS VLMGEDVETR RNFIQRNAKD VRFLDI