Gene Mrub_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_3019 
Symbol 
ID8881138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp3058505 
End bp3060055 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCse1 family CRISPR-associated protein 
Protein accessionYP_003508783 
Protein GI291297385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.06277e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0835975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCACGT TTAATCTAAT AACCCAGCCC TGGATTCCCG TGCGAACGGG AAACGAGCTT 
TTGCTTGTGA GCCTCGAGCA GGCCCTGCTC GAGGCTCACA AGTTCGAGCG CATCGAAGAC
CCCAGCCCGC TGGTGACGGC GGCCTTGCAC CGCTTGCTGC TGGCGGTGCT GCACCGGGCG
CTGGAGGGCC CCGCCGATGC CTACGAGGCG GCCGAGTGGT TCGAAGAGGG GTTCGATCGC
GGAAAGATTC AGACCTATCT GAGTAAGTAC CGGGATCGCT TCGACCTGTT CCACCCCGAG
CGGCCCTTCT ACCAGGTGCC CGACTTCAGT CTCGAGCGCT CCTGCCGCTC CTGGACGGTG
CTGGCCCCCG AACTCAACTC CGACAACAAC AAGGTGCTCT TCGACCACAC CGTCACCTCG
AGGCCCCGCC CCCTCCTGCC CGCCGAGGCC GCCCGGCTGT TGGTGGCCAA CCAGACCTTT
GCCCTTTCTG CAGGCAAGAG CGTGCTGTGC CACACCGCCA CGGCGCCGGT CGCGACGGCG
GCTCTGGCGC TGGTGCTGGG CGACAACCTC CACCAGACGC TGTGCCTGAA CCTAGTGGCC
TATCCCAAAA GGGAGCACGA GCACGATTTC GCCACCTGGG AGCAGGAGCC CCTGAAGGTT
GCCGACCTGG CGGACTGCGA GCGGGCCAGG GCCAGCGCCA AGGGCATCGT GCACCGCTAC
ACCTGGCTCG CGCGCGCGGT GCGCCTGCAC CCTGAGGAGG AAGATGGTCA GACTATCGTA
CGCTGGATCG CCTACGCCTC GGGGGTTCGC TACGAGGAGA GCCAGGTTCG GCGCGACCCG
ATGGTGGCGT TTCGCCCTGA CCCCAAAGAC CCCACCAGAG AGCGCCCCCT CGGCTTTAGC
GAGGGCCGGG CCTTGTGGCG CGACTTTGCC GCTTTGCTGC CCAAGCCCGG CTCGGCCCAG
GGGCTGGCCG TGGCCGACCA TGCCCGCAAC GTTTACCGCG CCCTGGGCCG CCATTTCAGG
CAGCGGGGCC TCCCCGTGAT GGTGGCGGGT CAGGCCAGTG ATCAGGCCAA GGTCGAACTC
TGGCGGGGGG AGATATACCG CCTGCCCGAG GCCATTTTGG GCGAGACCGA CCTGCGCGCT
TTTGTCGAGC AATGCCTGAA CGAAGCCGAA GTGATGGGAG AGGTTTTGAA TGGGGCTGCT
CGAGCCCTGG CCGCCGGGTT GCTGTCCATG GGGGATCGCA AGCCCCATAA AGACGACGTG
AGCAAGCTGG CCCGGAGCTT TCCTCACCAG GTGGCTTACT GGTCGGCGCT CGAGGGCCAT
TTCGCCGATT GGATAAGCCA GCTCGGCCCC GATTTCGAAA AGCAGCAGGC TCGGCTCGAG
CGGGCCTGGC GCGAGATTCT CCAGCGCGAG GCCCTGCAGG CCTGGCGGCT TGCTGCTTTG
GCCGCGGGGG ACGATGCCCG GGCTTTGCGG GCCGTTCACA AGGGCGAGGG CATTTTGCTG
GCCCATATCT ACAAACAAAA GGAGGTAGTG GGTGCAAAAG GAAGTCAGTA G
 
Protein sequence
MPTFNLITQP WIPVRTGNEL LLVSLEQALL EAHKFERIED PSPLVTAALH RLLLAVLHRA 
LEGPADAYEA AEWFEEGFDR GKIQTYLSKY RDRFDLFHPE RPFYQVPDFS LERSCRSWTV
LAPELNSDNN KVLFDHTVTS RPRPLLPAEA ARLLVANQTF ALSAGKSVLC HTATAPVATA
ALALVLGDNL HQTLCLNLVA YPKREHEHDF ATWEQEPLKV ADLADCERAR ASAKGIVHRY
TWLARAVRLH PEEEDGQTIV RWIAYASGVR YEESQVRRDP MVAFRPDPKD PTRERPLGFS
EGRALWRDFA ALLPKPGSAQ GLAVADHARN VYRALGRHFR QRGLPVMVAG QASDQAKVEL
WRGEIYRLPE AILGETDLRA FVEQCLNEAE VMGEVLNGAA RALAAGLLSM GDRKPHKDDV
SKLARSFPHQ VAYWSALEGH FADWISQLGP DFEKQQARLE RAWREILQRE ALQAWRLAAL
AAGDDARALR AVHKGEGILL AHIYKQKEVV GAKGSQ