Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_3014 |
Symbol | |
ID | 8881133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 3054943 |
End bp | 3055575 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Cse3 family CRISPR-associated protein |
Protein accession | YP_003508778 |
Protein GI | 291297380 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00083763 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0405409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTACCTGA GCCGACTCCA GCTTGATCCC CGCTCTAAGC AGGCCCGCAC CGACCTGGCC AGCCCCTATG AGCTGCACGC CACCCTGTGC CATGCCTTTG CCGGGCCCAA TCAGACCCCA GCGCGCTTTT TGTGGCGGGC TGAGGTAGGA AAAATCCCCA TTGTGCTGGT GCAGAGTGCC GGGATGCCGG ACTGGGAAAA ATTGGTCCAG CGTTTCCCCG GCTACTTTGC CCAGCCCCCA GCCTCCAAAC CCATCCCCCT CGAGCACCTC CAGCCTGCCC AGGTGCTGCG CTTTCGCCTA CGTGCTAACC CTACTGTGAC CAAAAAAGAT CCCAACAATC CTGATAGCAA AAAGCGCAAG CGCCACGGTT TGAAAACCCT CGAAGAGCAG CTCGAGTGGC TGCATCGCCA GGGAGCCAAA GGGGGCTTCT CGGTGCTGGG CGCGATGGTG GTTCAGAGCG AGCGGGTGCG CATGTACAAA CACGACGGCT CCGGCCCGAT TGTGCTTCAG TCGGTGCTGT ACGAGGGGCA TCTGAAGATC ACCGACCTCG AGGCTTTCAA ACACACCCTG GCTGCTGGCC TGGGCCACGC CAAAGCCCTG GGTTTTGGCC TGCTTTCCAT CGCAAAGGTG TAG
|
Protein sequence | MYLSRLQLDP RSKQARTDLA SPYELHATLC HAFAGPNQTP ARFLWRAEVG KIPIVLVQSA GMPDWEKLVQ RFPGYFAQPP ASKPIPLEHL QPAQVLRFRL RANPTVTKKD PNNPDSKKRK RHGLKTLEEQ LEWLHRQGAK GGFSVLGAMV VQSERVRMYK HDGSGPIVLQ SVLYEGHLKI TDLEAFKHTL AAGLGHAKAL GFGLLSIAKV
|
| |