Gene Mrub_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_3012 
Symbol 
ID8881131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp3053644 
End bp3054024 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content59% 
IMG OID 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_003508776 
Protein GI291297378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0235864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00725817 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTAGTGA TCGTCCTGGA GAAGGTACCC AAGACCCTGA GGGGTGAGCT CTCGCGCTGG 
ATGCTCGAGG TGAGTACCGG TGTGTTTGTG GGCAGCGTTT CGGCGCTGGT GCGCGACCTG
CTCTGGGAAA AGTGCGTCGC CAAAAAAACT GCTGGACGCT GCTGCCTGCT CTACCGCACC
AACAACGAAC AGGGCTTTGC CATCCGAACC CATGGCGACA CCACCCGCAC CCTCGTAGAC
TTTGACGGCC TGACCCTGGT GGCCGTGAAG AATGCCGAGT GGGAGCGTAT GCACCAAAAG
CGAAGTAGAA AAGCCAAACC AGGGGTGAAT CTTGACAATC AGACTCGGGA TTCTGACACT
TCCGGGGGAT CGAGCGGCTA G
 
Protein sequence
MVVIVLEKVP KTLRGELSRW MLEVSTGVFV GSVSALVRDL LWEKCVAKKT AGRCCLLYRT 
NNEQGFAIRT HGDTTRTLVD FDGLTLVAVK NAEWERMHQK RSRKAKPGVN LDNQTRDSDT
SGGSSG