| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2973 |
|---|
| Symbol | |
|---|
| ID | 8881091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 3008089 |
|---|
| End bp | 3009435 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003508737 |
|---|
| Protein GI | 291297339 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAG CCCGTTCTCG CAACCGCATA CCCTGGCGCT GGCTGGCTGT GGTTTTAGTG
CTGGCCGGCC TGGGGGTTGC GGCCTACTGG TTTTTGCGGC CCAAGCCCAC CAGCACTGCG
CCTACACTCG AGACCGCTAC CGTGCAGCAA GGGGTGTTCC GGGTCTCGGT CTCGGGGCCG
GGCACCCTCG AGGCCGTCCA GAGCCTCTCG GTTAAACCTG CCGTGAACGG CACGGTGCTC
AAGCTGCCCA CCGTGGGCGA CCGGGTGCAA AAAGGCCAGC TCATCGTGGA GCTTGACCCC
ACCGAGTATG CCCGCGCCCT GGAGAACGCC CGGCTGGCGT TGCAGAAGGC CCAGGCGACC
CTCGACAAGC TCCGGGCCGA CCAGCAAAGC GCCCTGGCCT CAGCCCAGCA AAGCGTTTCC
AGCGCCGAAG TGGCTTACGA CAGCGCCCGG CGCGACCTCG AGGCCGCCCG CACCAACCTC
GAGGCCACCC AGAAGCTCTT CGAGCTGGGG GGGGCCAGCG CCCAGAGCCT GCAAAGCGCG
CGCGATACCT ACGCCAAAGC CCAGGCCAGC CTGGAGATGG CCCGGGTTAA CCTGAACACC
GCGCGCCAGG CCCTGGCCCT GCGGAAAAGC GCCGACGCAC AGGAACTGAG AAACGCCCAG
ATCGCCGTGG ATCAGGCCCG CCTCGATGTC AAAAACGCCG AGGAAAACCT GGCCAGCACC
AAAATCTACG CCCCCTTCGA CGGGGTGGTC TCGGAGGTCA ACGCCCAGGT GGGGAGCATC
GGGGTGGGGG CCACGGTCAG CAACAGCACC GCCCTGCTCA CCCTGATTGA CGACAGCAGC
GTGAACCTGC CGGTGCAGAT TGACGAGAGC GAGATCGCCA AGGTCAAGGT GGGCCAGAAG
GTGGAGGTGA CCCTCGATGC CTTCAACAAT GAGACCTTCG AGGGGGTGGT GACGGCCATC
TCTCCCAGCG CCACCATCCA GCAGAACATC GCGGTGTTTT ACGTGACGGT GCGGATTGCC
AACCCCGAGC GCAAGCTGCG GCCCGGCATG ACCGCCGAGG GCGAGATTAT CGCGGAGGAA
ATTCCCAACG CCCTGACCAT CCCCAAGCGG GCGGTGCAGA CCGTGCGCAA CCGGGCCTAT
GTGGACGTGC TGCAGCCCGA CGGCAGCAAG GAGACCGTGC GGGTGGTGCT GGGGCCCGAC
GATGGGGTGA ACCAGGTGGT GCTAGAGGGC CTTGAGCCGC GCCAGACCGT GGTGCTGCCC
AGCCGCGTCC AGTCCACTTC CAGCAGCTCC AGCAACCAGG GCGGGCTGCG CCTGCCCCTG
GGGGCCCCTC CAGGAGGTGG GCGGTGA
|
|---|
| Protein sequence | MTQARSRNRI PWRWLAVVLV LAGLGVAAYW FLRPKPTSTA PTLETATVQQ GVFRVSVSGP
GTLEAVQSLS VKPAVNGTVL KLPTVGDRVQ KGQLIVELDP TEYARALENA RLALQKAQAT
LDKLRADQQS ALASAQQSVS SAEVAYDSAR RDLEAARTNL EATQKLFELG GASAQSLQSA
RDTYAKAQAS LEMARVNLNT ARQALALRKS ADAQELRNAQ IAVDQARLDV KNAEENLAST
KIYAPFDGVV SEVNAQVGSI GVGATVSNST ALLTLIDDSS VNLPVQIDES EIAKVKVGQK
VEVTLDAFNN ETFEGVVTAI SPSATIQQNI AVFYVTVRIA NPERKLRPGM TAEGEIIAEE
IPNALTIPKR AVQTVRNRAY VDVLQPDGSK ETVRVVLGPD DGVNQVVLEG LEPRQTVVLP
SRVQSTSSSS SNQGGLRLPL GAPPGGGR
|
|---|
| |