| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2720 |
|---|
| Symbol | |
|---|
| ID | 8880832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2757049 |
|---|
| End bp | 2758827 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_003508488 |
|---|
| Protein GI | 291297090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.78242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TCATCTCCCG GCGCGACCTC GAGTTCCTGC TGTATGAAGT GCTGGAGGTG
GAGGCCCTCA CCCAGCGCGA GCGCTACCGC GACCACAGCC GCGAGACCTT CAAAGATATC
CTGGACGTGG CCTACCGCAT CGCGCTCGAG CACTTCGCCA CCCACAACAA GAAAAACGAC
CAGGAAGAGC CCTGGTTCGA CGGCGAGCGG GTGCACACCA ACCCCGAGAT CAAGGCGGCC
CTCGAGGCCT ACCGCCAGGC GGGCCTGTTT GCGGCCACGC ACGACTACGC GCTGGGCGGC
ATTCAACTGC CCTACGTGAT TGCCACGGCC TACGGCGCTT TGTTCAAGGC GGCCAACATC
GCCACCGCCA GCTTTGCCCT GCTCACCGCG GGCAACGCCA ACCTTCTGCG CAAATATGGC
TCGCCGGCCC AGCAGAAAAA GTACCTGCTG CCCCAGCTCG AGGGCCGCTT TTTTGGCACC
ATGTGCCTCT CCGAGCCCCA CGCCGGCTCC TCGCTCACCG ACCTCCTGAC CCGCGCCGAA
CCCCAGGCGG ATGGCACCTA CCGGCTCAAC GGCTCCAAGA TGTGGATTTC CGGGGGCGAC
CACGAGATTG CCGAGAACAT CGTGCACCTG GTGCTGGCCA AGATTCCCGG AGGCCCCCCC
GGCGTCAAGG GGATTTCGCT CTTCATCGTG CCCAAGTACC TGGTGCACGA GGATGGCCGC
CTGGGGCCCC GCAACGGGGT GCGGGTGGCC GGCCTCAACC ACAAGATGGG CTACCGGGGG
ATTCCCAACT GCTTGCTGAG CCTCGAGGAC GCGGTGGGTG AGCTGGTGGG CGCGCCGCAC
CAGGGCCTGT CCTACATGTT CACCATGATG AACGAGGCCC GCATCGGGGT GGGCATGGGC
GCGATGGCGC TGGCCTACAC CGGCTACCTG CACGCGCTGG AATACGCCCA GACCCGCACC
CAGGGCCGCC GCCTGCACGA CAAGAACCCG GCCAGCCCCG CGGTTCCCAT CATCCAGCAC
CCCGATGTGC GCCGCATGCT GATCATGCAA AAAGCCTACG CCGAGGGCTG CTTGCACCTG
TGCCTGTATG CGGCCCGGCT GGTAGACGAG GAGCGTACCG CTCCCACCCC CGAGGCCGCC
GAGCAGGCCC GTTTGCTGCT CGAGGTGCTC ACCCCGGTGG TCAAGGCCTG GTCGAGCGAG
CTGGGTATGC GGGCCAACGA GCTGGCTATT CAGGTGCACG GGGGCTACGG CTACACCCGC
GACTACAACG TCGAGCAGTT CTACCGCGAC AACCGCCTCA ACGCCATTCA CGAGGGCACC
AACGGCATCC AGGCCCTCGA CCTGCTGGCG CGCAAGGTGG GGATGCAGAG AGGGCAGGGC
TTCCGGCTGT GGGCGCAGGA GGTCGAACGA ACCATCCAGG CCAGCCGGGA CACCGAGGCC
CTGCGGCCTT ACGCCGAAGC CCTCGAGCAG GCCCTGCAGA CCACCACCGA GGTCACCCAG
CACCTGCTGA ACAAGGCGGC CCAGGGGGCG GTGGAGCGGG CTTTTGCCAA CTCGTTTGCC
TATCTGGAAC TCTTCGGCAC GGTGACGCTG GCCTGGCTGT GGCTGGAGCA GGCGCGCAAA
GCGTTGGGAA AGGAAGGGGC TTTCTACCGG GGTAAGCTCG AGGCCGCCCG CTACTTTTTC
CTCTACGAGC TCGACAAGGT GCCGCTGCTG GCCGCGAGGC TGATGCGCCT GGACGATGTG
TTTTTGTACC CCGAGCAGGA CTGGCTGGTG GCAGATTGA
|
|---|
| Protein sequence | MEKLISRRDL EFLLYEVLEV EALTQRERYR DHSRETFKDI LDVAYRIALE HFATHNKKND
QEEPWFDGER VHTNPEIKAA LEAYRQAGLF AATHDYALGG IQLPYVIATA YGALFKAANI
ATASFALLTA GNANLLRKYG SPAQQKKYLL PQLEGRFFGT MCLSEPHAGS SLTDLLTRAE
PQADGTYRLN GSKMWISGGD HEIAENIVHL VLAKIPGGPP GVKGISLFIV PKYLVHEDGR
LGPRNGVRVA GLNHKMGYRG IPNCLLSLED AVGELVGAPH QGLSYMFTMM NEARIGVGMG
AMALAYTGYL HALEYAQTRT QGRRLHDKNP ASPAVPIIQH PDVRRMLIMQ KAYAEGCLHL
CLYAARLVDE ERTAPTPEAA EQARLLLEVL TPVVKAWSSE LGMRANELAI QVHGGYGYTR
DYNVEQFYRD NRLNAIHEGT NGIQALDLLA RKVGMQRGQG FRLWAQEVER TIQASRDTEA
LRPYAEALEQ ALQTTTEVTQ HLLNKAAQGA VERAFANSFA YLELFGTVTL AWLWLEQARK
ALGKEGAFYR GKLEAARYFF LYELDKVPLL AARLMRLDDV FLYPEQDWLV AD
|
|---|
| |