| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2689 |
|---|
| Symbol | |
|---|
| ID | 8880801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 2724310 |
|---|
| End bp | 2725497 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_003508458 |
|---|
| Protein GI | 291297060 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000331787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.185218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAA TACGTCGCAG GCAGTTGATC AAGGCAGGGC TCGGGCTAGC GGGGCTGGCA
GCCTCAAGCC GCTTTTCCTT CAGCCTGGCC CAGCAGGAAC CCATCCGCAT CGGGGTGGTG
CTCTCCTACT CGGGGCCATA CGCCCGGCTG GGCCAGGAGA TCACCCGCGG GATGGAGCTC
TACCTGGAAA AAGTGGGCTA CCAGGCGGGG GGCCGGCGCA TCCAGCTCTT GAAAGAGGAC
GAGGAGGCCG ATCCCGCGGT GGCGGTGCGC AAGGTGCGCA AGCTGGTCGA GCAGGATCGC
GTCAACCTGC TGAGCGGCAT TATCCTTTCG TCCTCGGCCT ACGGCATCCG GGACTACGTG
CACGAGCGGC AGATTCCCCT GGTCATCGCC AACGCCGCGG CCAACGGCAT CACCCGCGAA
CGCCGGAGCC CCTACATCTT CCGCACCTCC ATCAGCGCCT GGCAGCAGCA CTACCCCATG
GGCCCCTGGG TGGCCCGCAA CGTCGGGAAA AAGGTCTTTT TGCTGGCCCT GGACTACGCC
TTCGGTAAAG AAGCTACCGC CGCCTTCAAA GAGGGCTTCC TGCAGGCCGG CGGGGAGCCG
GTGGCCGAGC TGTACACCCC CCTGGGCAGC ACCGACTACA GCGCGGTGAT CTCGCGCATC
GCCGCGGCCC GCCCGGAAGC GGTGCACGCG GTGCTTTCCG GTAGCGATGC GGTCATCTTC
CTGCGCCAGT TCATCCAGTT TGGCCTCAAC CGCAGCATTC AGCTTGCGGT AAGCGGCGAG
GTAACCGATG AGAACGTGCT CGAGGCCATC GGGGATGCCG CTTTGGGGGC CAAGAGCGCC
GACCACTGGG TCTATACCCT GAACAACAGC GCCAACCGGG AGTTCATCCA GGCCTACCGG
CAGAAATTCA ACGCGGTGCC CAACCACTTT GCCGTGCGGG GCTACGACGC CATGCAGTTT
ATCGTGGACG CTATCAACAC CGTGCAGGGC GATTTGAGCA ACCGCCAGCG GCTGCTTGGG
GCCATTGAGA GCGCGAAAAT AATCAGCCCG CGGGGCTTTG TGCAGATGGA TCCGGAGACC
AACAACGTCA CCCAGCACGT CTACGCCCGG GAAGTAGCCC GCATCGATGG GGTGCTGACC
AACCGCCTGC TGGCCGACCT GGGCACCATC CGCGACCCTG GTAAGTAA
|
|---|
| Protein sequence | MATIRRRQLI KAGLGLAGLA ASSRFSFSLA QQEPIRIGVV LSYSGPYARL GQEITRGMEL
YLEKVGYQAG GRRIQLLKED EEADPAVAVR KVRKLVEQDR VNLLSGIILS SSAYGIRDYV
HERQIPLVIA NAAANGITRE RRSPYIFRTS ISAWQQHYPM GPWVARNVGK KVFLLALDYA
FGKEATAAFK EGFLQAGGEP VAELYTPLGS TDYSAVISRI AAARPEAVHA VLSGSDAVIF
LRQFIQFGLN RSIQLAVSGE VTDENVLEAI GDAALGAKSA DHWVYTLNNS ANREFIQAYR
QKFNAVPNHF AVRGYDAMQF IVDAINTVQG DLSNRQRLLG AIESAKIISP RGFVQMDPET
NNVTQHVYAR EVARIDGVLT NRLLADLGTI RDPGK
|
|---|
| |