Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2562 |
Symbol | |
ID | 8880672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2607766 |
End bp | 2608521 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003508332 |
Protein GI | 291296934 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00521448 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAAC TGTTTGAACT CAACCAACGG GTGGCTCTGG TGACCGGCGG TACCGGGGGG TTGGGCCTGG AGATGGCTCG AGCCCTAAGG GAAGCCGGTG CCCAGGTCGC CCTTTTAGGC CGCAACCAAG AGAGCCTGCG CTGCTGCGCC CGCGAGCTCG GGGCGCTGCC CGTGGTGGCC GATGTCACCT CTGCCCAGGA GGCTCAGGGT GCGGTGAAGC AGGTTTTGCA CGAGCTCGGG CGGGTGGACA TCCTGGTTAA CGCCGCGGGC ACCCATGTGA TTAAGCCCTC CCTCGAGCTA AGCCCTGCCG AATGGCAGCG GGTGCTCGAG GTCAACCTGA GCGGCAGTTT CTTCATGGCC CAGGCGGTGG CCGAGCCCAT GCGCGCCCAG GGGTATGGCC GCATTATCAA CATCGGCTCG GTAATGAGCG GACGTGGGCT ACCCCGCAGG GCCGCCTATG CCGCCAGCAA GGGCGGGCTG GTTACCCTCA CCTACACCCT GGCCCAGGAA TGGGGGGCGT GGGGCATCCG GGTCAACGCA ATTGCCCCCG GCTTCTTCCA CACCCATATG ACCGATGCAC TTTTTCAAGA TGCCCTCTGG GTCGAGCGCC TGGAACAGCG CGTCGCCGTA AGGCGGGCCG GACAGCCTCG AGACCTGGCT GGTGCGGTTG TGTTCCTGGC CTCTCCAGCC TCCGAATACG TTAACGGGCA CGTGCTGTAC GTGGACGGTG GCTTCACCAC AGGAGAACCC TGGTAA
|
Protein sequence | MKELFELNQR VALVTGGTGG LGLEMARALR EAGAQVALLG RNQESLRCCA RELGALPVVA DVTSAQEAQG AVKQVLHELG RVDILVNAAG THVIKPSLEL SPAEWQRVLE VNLSGSFFMA QAVAEPMRAQ GYGRIINIGS VMSGRGLPRR AAYAASKGGL VTLTYTLAQE WGAWGIRVNA IAPGFFHTHM TDALFQDALW VERLEQRVAV RRAGQPRDLA GAVVFLASPA SEYVNGHVLY VDGGFTTGEP W
|
| |