Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2558 |
Symbol | |
ID | 8880668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2604262 |
End bp | 2605239 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | TRAP dicarboxylate transporter subunit DctP |
Protein accession | YP_003508328 |
Protein GI | 291296930 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000108386 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGC TGGCTTGGTT TTTCCTCGTG TTACTGGTCA CAGGCGGTCT GGCCCAGGGA AGCAACCCCA CCTACACCCT TCGCTACAAC CACGTTCTGG CCCCCACCCA TCCGTTCCAC GCCGCGTTTC AAAAGTGGGC CCAGCGGGTG GCGGCCCGCA CCAAAGGCGA TCTGCAGATT TTGGTTTTCC ACAGCGCCCA GCTAGGGGTT GAAGAAGACA TCATCGAGCA GCTCCGGCGG GGCATTCCGG TCGGACAGAA CACCGATGCT GCGCGGATGG GCAACTACAT CCGGGAAATG GCGGTGATCA ACGCCCCCTA CTTTTTACAG GATCCTGCCC AGGTAGAACG CCTTAGCAAG ACCCCGTCGG TTCAGCGCTG GATCGATCAG CTCGCCTCGC AGTACGGCAT CCGGGTGCTC TGTATGAACT GGGTGCAGGG GGCGCGGCAC TTTATGACCA ACCGACCCAT CCGAACCCCA CAGGATCTAA GGGGCCTGCG CATCCGCACC CCTCCCGCCC CCATCTGGCA GGAATCGGTG CGGGCCCTGG GGGCCACCCC GGTTGCCCTG GCCTTTGGTG AGATTTACAG TGGGCTACAA CAGCGGGCCA TCGACGGCGT GGAGCTGGTC TACCAGAACA TCCTGGACAT GAGCCTGAAC GAGGTGCTGC GTTATGTGAA CGAGACGCAG CACATCCTGC TGGTCAACTT CCAGGTGGTG GGGGAAGCCT GGTTCCAGCG CCTGCCCAAA AACTATCAGC AAATCCTGGT AGAAGAATGC GAGAGCGCTG GCCGGGGCGT CACCCTGGAC ATCCAGGTGC AGACCGCTAA AGCCCAGCGG GAGGTGCAGC GCAGGGGTAT GACCATCGTA ACCAATACCA ACCTCGAGGC CTTCCGGCAG GCCGGCCAGG CCGCCTACGA GCGCCTGGGC CTGCTGGATG CCCGCCGCAG ACTCTACGAG GAGATGGGCT TGCGGTAA
|
Protein sequence | MKKLAWFFLV LLVTGGLAQG SNPTYTLRYN HVLAPTHPFH AAFQKWAQRV AARTKGDLQI LVFHSAQLGV EEDIIEQLRR GIPVGQNTDA ARMGNYIREM AVINAPYFLQ DPAQVERLSK TPSVQRWIDQ LASQYGIRVL CMNWVQGARH FMTNRPIRTP QDLRGLRIRT PPAPIWQESV RALGATPVAL AFGEIYSGLQ QRAIDGVELV YQNILDMSLN EVLRYVNETQ HILLVNFQVV GEAWFQRLPK NYQQILVEEC ESAGRGVTLD IQVQTAKAQR EVQRRGMTIV TNTNLEAFRQ AGQAAYERLG LLDARRRLYE EMGLR
|
| |