Gene Mrub_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2558 
Symbol 
ID8880668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2604262 
End bp2605239 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID 
ProductTRAP dicarboxylate transporter subunit DctP 
Protein accessionYP_003508328 
Protein GI291296930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.08386e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TGGCTTGGTT TTTCCTCGTG TTACTGGTCA CAGGCGGTCT GGCCCAGGGA 
AGCAACCCCA CCTACACCCT TCGCTACAAC CACGTTCTGG CCCCCACCCA TCCGTTCCAC
GCCGCGTTTC AAAAGTGGGC CCAGCGGGTG GCGGCCCGCA CCAAAGGCGA TCTGCAGATT
TTGGTTTTCC ACAGCGCCCA GCTAGGGGTT GAAGAAGACA TCATCGAGCA GCTCCGGCGG
GGCATTCCGG TCGGACAGAA CACCGATGCT GCGCGGATGG GCAACTACAT CCGGGAAATG
GCGGTGATCA ACGCCCCCTA CTTTTTACAG GATCCTGCCC AGGTAGAACG CCTTAGCAAG
ACCCCGTCGG TTCAGCGCTG GATCGATCAG CTCGCCTCGC AGTACGGCAT CCGGGTGCTC
TGTATGAACT GGGTGCAGGG GGCGCGGCAC TTTATGACCA ACCGACCCAT CCGAACCCCA
CAGGATCTAA GGGGCCTGCG CATCCGCACC CCTCCCGCCC CCATCTGGCA GGAATCGGTG
CGGGCCCTGG GGGCCACCCC GGTTGCCCTG GCCTTTGGTG AGATTTACAG TGGGCTACAA
CAGCGGGCCA TCGACGGCGT GGAGCTGGTC TACCAGAACA TCCTGGACAT GAGCCTGAAC
GAGGTGCTGC GTTATGTGAA CGAGACGCAG CACATCCTGC TGGTCAACTT CCAGGTGGTG
GGGGAAGCCT GGTTCCAGCG CCTGCCCAAA AACTATCAGC AAATCCTGGT AGAAGAATGC
GAGAGCGCTG GCCGGGGCGT CACCCTGGAC ATCCAGGTGC AGACCGCTAA AGCCCAGCGG
GAGGTGCAGC GCAGGGGTAT GACCATCGTA ACCAATACCA ACCTCGAGGC CTTCCGGCAG
GCCGGCCAGG CCGCCTACGA GCGCCTGGGC CTGCTGGATG CCCGCCGCAG ACTCTACGAG
GAGATGGGCT TGCGGTAA
 
Protein sequence
MKKLAWFFLV LLVTGGLAQG SNPTYTLRYN HVLAPTHPFH AAFQKWAQRV AARTKGDLQI 
LVFHSAQLGV EEDIIEQLRR GIPVGQNTDA ARMGNYIREM AVINAPYFLQ DPAQVERLSK
TPSVQRWIDQ LASQYGIRVL CMNWVQGARH FMTNRPIRTP QDLRGLRIRT PPAPIWQESV
RALGATPVAL AFGEIYSGLQ QRAIDGVELV YQNILDMSLN EVLRYVNETQ HILLVNFQVV
GEAWFQRLPK NYQQILVEEC ESAGRGVTLD IQVQTAKAQR EVQRRGMTIV TNTNLEAFRQ
AGQAAYERLG LLDARRRLYE EMGLR