Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2277 |
Symbol | |
ID | 8880386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2327094 |
End bp | 2328941 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003508050 |
Protein GI | 291296652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00527261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000210766 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACGAG CGTTTGCGAT CCTGATGCTA ATGGGTGGGT TGGCCCTCGC CGGGCCTCAG GACAACAGCC TGATTATCGG CGCAGCTCAG GAGCCCCGGG TGCTGGCAGG GGATGTGGTC AATGTTATCT CCAACCAGGC CATCAAGTTT GAGATTGAAA ACTTCTTGTT TGCTCCAATT ATCCAGACCA ATCGCGACTT GGAGCAAATC CCCGTGGTAG TAACCGAGGT GCCGACCCAG CAGAACGGGC GCCTGCGTTT TGCCAACATC AGGCCGGGGG TGCGGCGCCT CGAGCTCGAC TACACCATCC GGCCCGATGC GGTCTGGTCG GATGGGCGGC CCATCACCAC CGACGATGTG GCCCTGTACT TTGAAATGGG TAAGACCAAG GGGGTGCCCT CCACCAACGT TGACTTTTTT GACCGGGCCA CCCTGCGGGT ACGGGATGCC CGCAACTTTA CAGTGATCCT CGAGCCGGCC TACTTCTACG ACCTGGACAT CAACCAAATC TACTACGCTC CCAACCACAT CATGCGCGCG GAGTGGGATA AGGCCAAAGC GGCGGCGGCC CAGGTTAGTG ATACAGCACG GCAGGCCGAG ATTTTCCGTA ACTTCTTTAC CCAGTTTTCC TCCCCTCAGT ATCTGAACAG CGGGAAGATG GTCTACTCGG GCCCTTTTAC CCTGACCCGC TGGGTGCCCG GTAGCAGCAT TGAGATGCGG CGCAACCCGC GCTTCTGGAT CAAGCCGCCT GGTGGCGAGG ACAAATACGT GCAGCGCGTA ATCTACCGCA TTATCCAGAA CACCAACTCG CTCCTGGTGG CCATCCTGGG CGGTGGGATA GATGCAACCT CGAGCGTCGC GATCTCCTTC GATCAGGGCC GCAGCAAGCA GCTCACCAGC CGCGCACCGG GCCGTTTTGA GATATGGGCG ATAGAAACTC CATTTTTCGA GCACCTGGAG ATCAACCAGT TCACCAACGT GCAGCGGGTG CGCGACCTGA TGCTGGATAA CGTCAAGACC CGCCAGGCCC TGATCTACGC CATGAACCGT GAAGGCATTA CCAAAGCCTT CTTTGGCGGG CTGTACACGG TGGCCCCCAC CTGGGTTTCT CCCAAGAACC CCATGTTTAA CCCCAACGTG GCGAGATACC CTTACAACCC GGAACGGGCC CGCCAGCTCC TGGCCGAGCT GGGCTGGCGG CCGGGGCCCG ACGGCATTTT GCAGCGCACC GTGGATGGCC GTACCGTGCG CTTTGAGATC GAGTGGGCCA CCACCGCCGG CAACCAGGTG CGCGAGCGCA TCCAGCAGTT TGTAGCGGAG AACTACCGAC AGGTGGGGAT CGCGGTGCGC ATTAACAACG CGCCCAGCGC CGTGGTGTTA GGGGCGCAGT ACCGCTCGAG GGCCCAGGAA GGGAGCTGGA CGGGTTTCCT GCAGTACGCC TTTAGCCTGG GCCTGGCCGA CGACGGGGTG CGTTCGGCCT GCCGGGACGA GGAGGGTAAG GTGGTCTATA TACCCACCCG TGAAAACGGA TTCCGCGGCC TCAACTTTGG CGGCTGGTGC AACGAGGAGT ACGACCGTTT GCGCAACCAG GCGGTTACCG AGTTCGATGT AAACCGGCGC AAGCAGTTGT TTGCTCGTAT GCAGGAGATC TGGGCCAACG AAGTGGCGAT GATCCCGCTG TACTTCCAGT CCGATGCCCG CGTGTACAAG GTGGGCCTGC TCAACTACGT CTCCTCAACC TTTGCCAGCT CGGCCTACCC GACCATCGAG CCCTGGCTCA TCGGCTGGCA GTCGCGTGGA GCCCAGAAGG TCTACGACCA GGCCAAGTAC GGCCAGCCCA TCAAGTAA
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Protein sequence | MKRAFAILML MGGLALAGPQ DNSLIIGAAQ EPRVLAGDVV NVISNQAIKF EIENFLFAPI IQTNRDLEQI PVVVTEVPTQ QNGRLRFANI RPGVRRLELD YTIRPDAVWS DGRPITTDDV ALYFEMGKTK GVPSTNVDFF DRATLRVRDA RNFTVILEPA YFYDLDINQI YYAPNHIMRA EWDKAKAAAA QVSDTARQAE IFRNFFTQFS SPQYLNSGKM VYSGPFTLTR WVPGSSIEMR RNPRFWIKPP GGEDKYVQRV IYRIIQNTNS LLVAILGGGI DATSSVAISF DQGRSKQLTS RAPGRFEIWA IETPFFEHLE INQFTNVQRV RDLMLDNVKT RQALIYAMNR EGITKAFFGG LYTVAPTWVS PKNPMFNPNV ARYPYNPERA RQLLAELGWR PGPDGILQRT VDGRTVRFEI EWATTAGNQV RERIQQFVAE NYRQVGIAVR INNAPSAVVL GAQYRSRAQE GSWTGFLQYA FSLGLADDGV RSACRDEEGK VVYIPTRENG FRGLNFGGWC NEEYDRLRNQ AVTEFDVNRR KQLFARMQEI WANEVAMIPL YFQSDARVYK VGLLNYVSST FASSAYPTIE PWLIGWQSRG AQKVYDQAKY GQPIK
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