Gene Mrub_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2277 
Symbol 
ID8880386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2327094 
End bp2328941 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content60% 
IMG OID 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003508050 
Protein GI291296652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00527261 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.10766e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACGAG CGTTTGCGAT CCTGATGCTA ATGGGTGGGT TGGCCCTCGC CGGGCCTCAG 
GACAACAGCC TGATTATCGG CGCAGCTCAG GAGCCCCGGG TGCTGGCAGG GGATGTGGTC
AATGTTATCT CCAACCAGGC CATCAAGTTT GAGATTGAAA ACTTCTTGTT TGCTCCAATT
ATCCAGACCA ATCGCGACTT GGAGCAAATC CCCGTGGTAG TAACCGAGGT GCCGACCCAG
CAGAACGGGC GCCTGCGTTT TGCCAACATC AGGCCGGGGG TGCGGCGCCT CGAGCTCGAC
TACACCATCC GGCCCGATGC GGTCTGGTCG GATGGGCGGC CCATCACCAC CGACGATGTG
GCCCTGTACT TTGAAATGGG TAAGACCAAG GGGGTGCCCT CCACCAACGT TGACTTTTTT
GACCGGGCCA CCCTGCGGGT ACGGGATGCC CGCAACTTTA CAGTGATCCT CGAGCCGGCC
TACTTCTACG ACCTGGACAT CAACCAAATC TACTACGCTC CCAACCACAT CATGCGCGCG
GAGTGGGATA AGGCCAAAGC GGCGGCGGCC CAGGTTAGTG ATACAGCACG GCAGGCCGAG
ATTTTCCGTA ACTTCTTTAC CCAGTTTTCC TCCCCTCAGT ATCTGAACAG CGGGAAGATG
GTCTACTCGG GCCCTTTTAC CCTGACCCGC TGGGTGCCCG GTAGCAGCAT TGAGATGCGG
CGCAACCCGC GCTTCTGGAT CAAGCCGCCT GGTGGCGAGG ACAAATACGT GCAGCGCGTA
ATCTACCGCA TTATCCAGAA CACCAACTCG CTCCTGGTGG CCATCCTGGG CGGTGGGATA
GATGCAACCT CGAGCGTCGC GATCTCCTTC GATCAGGGCC GCAGCAAGCA GCTCACCAGC
CGCGCACCGG GCCGTTTTGA GATATGGGCG ATAGAAACTC CATTTTTCGA GCACCTGGAG
ATCAACCAGT TCACCAACGT GCAGCGGGTG CGCGACCTGA TGCTGGATAA CGTCAAGACC
CGCCAGGCCC TGATCTACGC CATGAACCGT GAAGGCATTA CCAAAGCCTT CTTTGGCGGG
CTGTACACGG TGGCCCCCAC CTGGGTTTCT CCCAAGAACC CCATGTTTAA CCCCAACGTG
GCGAGATACC CTTACAACCC GGAACGGGCC CGCCAGCTCC TGGCCGAGCT GGGCTGGCGG
CCGGGGCCCG ACGGCATTTT GCAGCGCACC GTGGATGGCC GTACCGTGCG CTTTGAGATC
GAGTGGGCCA CCACCGCCGG CAACCAGGTG CGCGAGCGCA TCCAGCAGTT TGTAGCGGAG
AACTACCGAC AGGTGGGGAT CGCGGTGCGC ATTAACAACG CGCCCAGCGC CGTGGTGTTA
GGGGCGCAGT ACCGCTCGAG GGCCCAGGAA GGGAGCTGGA CGGGTTTCCT GCAGTACGCC
TTTAGCCTGG GCCTGGCCGA CGACGGGGTG CGTTCGGCCT GCCGGGACGA GGAGGGTAAG
GTGGTCTATA TACCCACCCG TGAAAACGGA TTCCGCGGCC TCAACTTTGG CGGCTGGTGC
AACGAGGAGT ACGACCGTTT GCGCAACCAG GCGGTTACCG AGTTCGATGT AAACCGGCGC
AAGCAGTTGT TTGCTCGTAT GCAGGAGATC TGGGCCAACG AAGTGGCGAT GATCCCGCTG
TACTTCCAGT CCGATGCCCG CGTGTACAAG GTGGGCCTGC TCAACTACGT CTCCTCAACC
TTTGCCAGCT CGGCCTACCC GACCATCGAG CCCTGGCTCA TCGGCTGGCA GTCGCGTGGA
GCCCAGAAGG TCTACGACCA GGCCAAGTAC GGCCAGCCCA TCAAGTAA
 
Protein sequence
MKRAFAILML MGGLALAGPQ DNSLIIGAAQ EPRVLAGDVV NVISNQAIKF EIENFLFAPI 
IQTNRDLEQI PVVVTEVPTQ QNGRLRFANI RPGVRRLELD YTIRPDAVWS DGRPITTDDV
ALYFEMGKTK GVPSTNVDFF DRATLRVRDA RNFTVILEPA YFYDLDINQI YYAPNHIMRA
EWDKAKAAAA QVSDTARQAE IFRNFFTQFS SPQYLNSGKM VYSGPFTLTR WVPGSSIEMR
RNPRFWIKPP GGEDKYVQRV IYRIIQNTNS LLVAILGGGI DATSSVAISF DQGRSKQLTS
RAPGRFEIWA IETPFFEHLE INQFTNVQRV RDLMLDNVKT RQALIYAMNR EGITKAFFGG
LYTVAPTWVS PKNPMFNPNV ARYPYNPERA RQLLAELGWR PGPDGILQRT VDGRTVRFEI
EWATTAGNQV RERIQQFVAE NYRQVGIAVR INNAPSAVVL GAQYRSRAQE GSWTGFLQYA
FSLGLADDGV RSACRDEEGK VVYIPTRENG FRGLNFGGWC NEEYDRLRNQ AVTEFDVNRR
KQLFARMQEI WANEVAMIPL YFQSDARVYK VGLLNYVSST FASSAYPTIE PWLIGWQSRG
AQKVYDQAKY GQPIK