| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_2273 |
|---|
| Symbol | |
|---|
| ID | 8880382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 2322712 |
|---|
| End bp | 2323503 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_003508046 |
|---|
| Protein GI | 291296648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000217948 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGACC TCGAGCTATC CACACCAACC AACCTGAGGC GCATCCTGCT CACCCTCGAG
TACGACGGCA GCGGCTTCGC TGGCCTGCAA ACCCAGGCCC AGGGCGAACG CACGGTGCAG
CAGGAACTCG AGGCCGCCCT TAGCCAAATT CCTGGTGCGA GGCCCAAAAT CTGGCCCTGT
GGCCGCACCG ATGCCGGGGT GCACGCCCTG GCCATGCCGG TGCATTACGA CACCCTGGAC
AACATCCCCA CCGAAAAAAT CCCCCACGCC CTCAACACCC TCCTGCCCCC CGATATCCGG
GCCCTGGCCG CGCAGGAAGT CCCGGCGGAC TTTCACGCCC GCAAAAGCTG CCACTGGCGC
GAGTACCGCT ACCGCATCCT GCAGCGCCGC ATGCCCCCGG CCTTGGATCG TCACCGGGTC
TGGTGGATTC CCCACTCGCT CAACCTGATC CCCATGCGGC ATGCGCTGGA ATGCCTGGTG
GGCACCCACG ACTTCAAAGC TTTCGCCGTC AAGGAGGAGC GGGCTACGGT GCGTGAAATC
TACCGCGCCC ACCTCGAGGT CTGGCCCACC GAGGGGGGGC GGGAGATTTG GATCGAGTTT
GTGGGTTCAG GCTTTTTGCG CGGCCAGGTG CGCAGCATGG TGGGCACCCT GGTAGAGATT
GGACTGGGCA AGCGGGACTC GAGCAGCATC CAGAGCCTGC TGGCCAGCGG CAGCCGCAAA
GACGCCGGCC CCACCGCCCC CGCCCAGGGC CTGTACTTCG TACGGGCCGG CTACCAGCCC
TACCGCCAGT AG
|
|---|
| Protein sequence | MEDLELSTPT NLRRILLTLE YDGSGFAGLQ TQAQGERTVQ QELEAALSQI PGARPKIWPC
GRTDAGVHAL AMPVHYDTLD NIPTEKIPHA LNTLLPPDIR ALAAQEVPAD FHARKSCHWR
EYRYRILQRR MPPALDRHRV WWIPHSLNLI PMRHALECLV GTHDFKAFAV KEERATVREI
YRAHLEVWPT EGGREIWIEF VGSGFLRGQV RSMVGTLVEI GLGKRDSSSI QSLLASGSRK
DAGPTAPAQG LYFVRAGYQP YRQ
|
|---|
| |