Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2272 |
Symbol | |
ID | 8880381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 2321548 |
End bp | 2322639 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter-like protein |
Protein accession | YP_003508045 |
Protein GI | 291296647 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000030703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACACCC AACACGCCGA ACGCCCCACC TCCCCTACCC AGGCCCACGC CCCCATCCTG CGCGTGCAGG GCCTGACCAA GCGCTTCCAC CCGGACTTTC CTCCCGTAGT AGAGAACGTG GGTTTTACAG TGGAGCAGGG CGAGGTGTTT GCCCTGCTAG GCCCCTCGGG TTGTGGCAAG ACTACCACCC TGCGGCTCAT CGCCGGTTTC GAGCAGCCGG AAAGCGGCCA GGTCTGGCTG GAGGGGCGGG AAATTACCCG GCTACCCGCA GAGGAACGGG GCATCGGCTT TGTATTTCAG GACTACGCCC TGTTTCCGCA CCTGAGCGTG TTTGAGAATG TGGCCTTCGG TCTGCGCCGC CTGCGGGGTA AAGTGCGGCA AGCCCGCGTC CTGGAGGTGC TGGGCCTGGT GGGCCTGACC GTCTTCAAGG ATCGCAAGCC CGGTGAGCTC TCCGGGGGTC AGCAGCAGCG CGTGGCCCTG GCCCGGGCCA TCGCCCCCGG CCCCAAGCTG GTGCTGCTCG ACGAACCCTT CAGCAGCCTG GACGCCGCCC TGCGCCAGGC CACCCGCGAC GAGGTGCGCG CCCTCCTGAA GCAGGCCGGC ATCGGGGCCA TCCTGGTCAC CCACGACCAG GAGGAGGCCC TTTCCTTCGC CGACCGGCTG GCGGTCATGC GCAGCGGGCA GCTCGAGCAG GTCGGCACCC CCGAGGAGGT CTACCACCGC CCCCGCACCC CCTTTGTGGC CCAGTTTCTA GGCCGCACCA ACCTGATCCC GGGCGAAGCC CGGGGCCTCG AGGCCGAGAC CCCGCTGGGG CGTATCCTGC TCTCGGAGGA GGCTCACGGT GCGGTGCTGC TCTCGTTGCG GCCCGAGGGG CTGGGCCTGG CCATGCCCCT GGGCCATCTG GGCATCAGCG GCAAGCAGCT CGAGGGCACC GTGCTGGCTC GAGAGTTCAA GGGCCACGAC ATGACCTACC GCGTCCAGCT CGGCAACCGC GAGCTGATCG TGCAGGAAAG CCCCGAAAGC CCCTTCCGTC CCGGCGATAA GGTGCGGGTG CTGGTACGGG CCAAGGCCGT GGTGGTGGGG CGGGGCCAGT AA
|
Protein sequence | MNTQHAERPT SPTQAHAPIL RVQGLTKRFH PDFPPVVENV GFTVEQGEVF ALLGPSGCGK TTTLRLIAGF EQPESGQVWL EGREITRLPA EERGIGFVFQ DYALFPHLSV FENVAFGLRR LRGKVRQARV LEVLGLVGLT VFKDRKPGEL SGGQQQRVAL ARAIAPGPKL VLLDEPFSSL DAALRQATRD EVRALLKQAG IGAILVTHDQ EEALSFADRL AVMRSGQLEQ VGTPEEVYHR PRTPFVAQFL GRTNLIPGEA RGLEAETPLG RILLSEEAHG AVLLSLRPEG LGLAMPLGHL GISGKQLEGT VLAREFKGHD MTYRVQLGNR ELIVQESPES PFRPGDKVRV LVRAKAVVVG RGQ
|
| |