Gene Mrub_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_2089 
Symbol 
ID8880198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp2129476 
End bp2130357 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content57% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003507863 
Protein GI291296465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.40561e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.90976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACTA TTCGACAAAC CCGCTTGGCC TGGCTGCTGG TACTGCCCAC GCTCTTGGTG 
GTGGCGTTTG TGGCGGGCTA TCCCCTGGCG CAGGTGTTCT ACTACTCGTT TCACCGGGCC
GATATCTCAT TTGTAGAGCC CACCGAGTTT GTGGGTTTTA AGAACTACAT TTTCCTGTTG
CAAGACCCCG ACTTTAGGGG TGCGCTCTGG AACACCCTGC GCTTTACAGT GGTTTCGGTT
TTTCTCGAGA CCGTGCTCGG CCTGGCTATT GCCCTGGTGA TCCACTCCAA CTTTAGAGGC
CGCGGTATCG TGCGGGCGGC CATCCTGATT CCCTGGGCCA TCCCCACGGT GGTCTCGGCC
AAGATGTGGC AGTGGATGCT CAACGACATC TACGGGGTGA TTAACGTCAT CCTGGTCAAT
ACCGGTTTGG TAGCCAACAA AATCGCCTTC CTGGCCAACC CCAATACCGT GCTGTGGGCC
ATGGTGGCGG TGGATGTGTG GAAGACCACC CCCTTCATGG CCTTGCTGCT TTTGGCCGGG
TTGCAGTTGA TTCCATCCGA CATCTACGAG GCCGCCGACA TTGACGGGGC CAGCAAGTGG
CAGCAGTTCT GGACGCTGAC GCTCCCGCTA CTAACCCCAG CCCTGGTGGT GGCCCTTATT
TTCCGTACCC TGGACGCGCT GCGGGTTTTC GACGTGATTT TCGTGATGGT GGGGGTCAAC
ACCGCTACCC GCAGCCTGGC CATTTACAAC CGCCAGACCC TGATTGATTT TCAGGACTTG
GGGTATGGTT CTGCGGTATC GGTGGCGATT TTGGTGATCA TCTTTATCTT TGTGGTGCTG
TACATGCGCG TGGCTGGAAA GGGGGTGCGC GGTGAGGACT AA
 
Protein sequence
MLTIRQTRLA WLLVLPTLLV VAFVAGYPLA QVFYYSFHRA DISFVEPTEF VGFKNYIFLL 
QDPDFRGALW NTLRFTVVSV FLETVLGLAI ALVIHSNFRG RGIVRAAILI PWAIPTVVSA
KMWQWMLNDI YGVINVILVN TGLVANKIAF LANPNTVLWA MVAVDVWKTT PFMALLLLAG
LQLIPSDIYE AADIDGASKW QQFWTLTLPL LTPALVVALI FRTLDALRVF DVIFVMVGVN
TATRSLAIYN RQTLIDFQDL GYGSAVSVAI LVIIFIFVVL YMRVAGKGVR GED