Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_2089 |
Symbol | |
ID | 8880198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 2129476 |
End bp | 2130357 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003507863 |
Protein GI | 291296465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000240561 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.90976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACTA TTCGACAAAC CCGCTTGGCC TGGCTGCTGG TACTGCCCAC GCTCTTGGTG GTGGCGTTTG TGGCGGGCTA TCCCCTGGCG CAGGTGTTCT ACTACTCGTT TCACCGGGCC GATATCTCAT TTGTAGAGCC CACCGAGTTT GTGGGTTTTA AGAACTACAT TTTCCTGTTG CAAGACCCCG ACTTTAGGGG TGCGCTCTGG AACACCCTGC GCTTTACAGT GGTTTCGGTT TTTCTCGAGA CCGTGCTCGG CCTGGCTATT GCCCTGGTGA TCCACTCCAA CTTTAGAGGC CGCGGTATCG TGCGGGCGGC CATCCTGATT CCCTGGGCCA TCCCCACGGT GGTCTCGGCC AAGATGTGGC AGTGGATGCT CAACGACATC TACGGGGTGA TTAACGTCAT CCTGGTCAAT ACCGGTTTGG TAGCCAACAA AATCGCCTTC CTGGCCAACC CCAATACCGT GCTGTGGGCC ATGGTGGCGG TGGATGTGTG GAAGACCACC CCCTTCATGG CCTTGCTGCT TTTGGCCGGG TTGCAGTTGA TTCCATCCGA CATCTACGAG GCCGCCGACA TTGACGGGGC CAGCAAGTGG CAGCAGTTCT GGACGCTGAC GCTCCCGCTA CTAACCCCAG CCCTGGTGGT GGCCCTTATT TTCCGTACCC TGGACGCGCT GCGGGTTTTC GACGTGATTT TCGTGATGGT GGGGGTCAAC ACCGCTACCC GCAGCCTGGC CATTTACAAC CGCCAGACCC TGATTGATTT TCAGGACTTG GGGTATGGTT CTGCGGTATC GGTGGCGATT TTGGTGATCA TCTTTATCTT TGTGGTGCTG TACATGCGCG TGGCTGGAAA GGGGGTGCGC GGTGAGGACT AA
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Protein sequence | MLTIRQTRLA WLLVLPTLLV VAFVAGYPLA QVFYYSFHRA DISFVEPTEF VGFKNYIFLL QDPDFRGALW NTLRFTVVSV FLETVLGLAI ALVIHSNFRG RGIVRAAILI PWAIPTVVSA KMWQWMLNDI YGVINVILVN TGLVANKIAF LANPNTVLWA MVAVDVWKTT PFMALLLLAG LQLIPSDIYE AADIDGASKW QQFWTLTLPL LTPALVVALI FRTLDALRVF DVIFVMVGVN TATRSLAIYN RQTLIDFQDL GYGSAVSVAI LVIIFIFVVL YMRVAGKGVR GED
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