Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1936 |
Symbol | |
ID | 8880045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1992447 |
End bp | 1994726 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003507712 |
Protein GI | 291296314 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.609116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000107208 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAACC GCACGTGGAA AGCTGTTCTT CTCATCGGGC TACTCCTAGC CGCTATTGTG GGGCTGTTCC GCCCCTGGGA AGCCCGCAAC CCACAAAAAC CCTTGCTGCC CGCCGATGGC CTGATCCGGC TGGGCCTCGA CCTACAAGGG GGCTTGCGCA TCACCCTCAA GGTGGCCGAG CCCAACCCCG ACCCCTCTGT GGCTAAAACC GAGCTGGATG TGGCCCGCAC CGTTATCGAG AACCGGGTCA ACGCCATCGG GGTGGCTGAG CCCCTGGTGC AGGTACAGGG CAACGATCGC ATCATCGTGG AATTGCCGGG CCTGAAGCAG GATCAGCAGG AACGCGCCCT GGGCCTGATC GGCCAGACCG CTAAGCTGGA GTTCCGCATC GTCAATCAGG GGGCCACCGG TACCACCGTG GCACAGATCA ACGAGCAGCT ACGCAGCTCT GGCCTCAGCG GGGCCGCCCT GGCCGCCCGC CGGGCCGAAC TTGAGAAAAA CCTATACAAG CTCGAGGACC TGGGCCCTCC CCTGCTCACC GGTAGCGACC TGCGTACCGC CAATGCCTCT TTCGACCAGT TTGGACGTCC TCAGGTGGAT ATGGAGTTCA CCCCCGAGGG GGCCAAAAAG TTCGAGGAGG TCACCCGGGC CAACGTGGGC CGCCAGCTCG CCGTGGTGCT CGACGGTAAG GTCTACACCG CACCCAGCAT CCGCCAGGCC ATTGCCGGCG GGCGGGCTGT AATCGAAGGA CTTTCCGGTG TGCAGGAAGC CTCTGACATC GCCCTGGTGC TGCGCTCGGG CTCGCTGCCG GTCAAGCTGG AGGTAGCCGA GACCCGCGCC ATCGGCCCCA CCCTCGGCCA GGATGCCATC AACGCGGGTA TCCAGGCAGG CATTATCGGC ACAGTCTTGT TGTTTATCCT GATTTTCGCC TACTACGGCT TCTGGATGGG CCTGGTGGCC GCCCTGGGCC TCATCTACAC CGCCATTCTG CTGCTGGCCT CCATCTCGCT GCTGGGGGCC ACCCTCACCC TGCCGGGCAT CGCCGGCCTG ATTCTCACCC TGGGCGCTGC GGTAGACGGC AACGTGCTCT CCTTCGAGCG CATCAAGGAA GAGCTCAAAA TGGGCAAGAA GTTCCGTCAG GCCATACCGG GCGGCTTCTC CCATTCCATC ATTACCATCC TCGACGTCAA CATGTGCCAC CTGCTGGCCG CGGCCGCCCT CTACCAGTAC AGCACCGGGC CGGTGCGGGG TTTTGCAGTC ATGCTGGCGC TGGGCGTGGT GACCTCGGTC TTCTCCAACC TGGTCTTCAG CCGCTGGCTT CTGGAGCTCA TCGGCGACCG CTGCGAGGTC AGGCCCCCCT ACTGGCTGTG GGGTACCAAA ATCGACTTCC TGGGCATCTC GCGCTATGTT ACCGCGGCCT CCCTCACACT AGCTGTCATC GCGGCCGGTA TCGTGTTTGT CAAAGGCTTC AACTTCGGCA TCGACTTCAC CGGCGGTACG GCCTTTACCA TCCGCGTACC CGAGGGAACC CGGGCCGAGC AAATCCGCAG TTTTCTCGAT AATGCCGGGA TCGCCGAGCT CCGCGGGGCC GAATCGGTGA TCACCTCGCT TTCCAGCGTG AACGGCAACG AATTCTCGGT ACGGGTGCGG CAAATCAGCG AGGAACAGCG CATCGAGCTG GAGAAAAAGT TCCAGGAAAG CCTGCAGGCC ACCATCCTTC AGTCCGAAAC GGTAGGCCCG GCCATTGGTT CGGAGCTGCG CCGGAATACC ATTTTTGCGG TACTGGTGGG CCTGGCGCTG ATTCTAATCT ACGTGGCCTT CCGCTTTGAC TGGGTGTTTG GCGTCGCCAG CGTGATTGCG GTGGGGCACG ACGTGGCGAT TGTGGCGGGC ATGTACAGCT TGTTGGGGCT GGAGTTCTCC ATCCCGACCG TAGCGGTTCT GCTCACCATC GTTGGTTTCT CGATTAACGA CTCGGTGATT ATCTCGGATC GCATCCGCGA AAACCTCAAA ATCATGCGGG GCAGGAGTTA CTACGAGATT GTGAACGCCT CCATCAACCA GACCCTCTCC CGCACCCTCA TGACCTCCCT CTCCACCATG CTGCCCATCC TGGCCCTGCT CTTCTTGGGT GGGCCGGTGC TGCGCGACTT CTCGCTGGCT ATCTTCGTGG GCTTTGTGGT GGGTACGTAC TCCTCCATCT ACGTGGTTTC GGCCCTGGTG GTCTGGTACA AGACCCTCGA GCAGCGTCGC AAAGCCACCG CGAAAGCCCG CTCAGCCTGA
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Protein sequence | MTNRTWKAVL LIGLLLAAIV GLFRPWEARN PQKPLLPADG LIRLGLDLQG GLRITLKVAE PNPDPSVAKT ELDVARTVIE NRVNAIGVAE PLVQVQGNDR IIVELPGLKQ DQQERALGLI GQTAKLEFRI VNQGATGTTV AQINEQLRSS GLSGAALAAR RAELEKNLYK LEDLGPPLLT GSDLRTANAS FDQFGRPQVD MEFTPEGAKK FEEVTRANVG RQLAVVLDGK VYTAPSIRQA IAGGRAVIEG LSGVQEASDI ALVLRSGSLP VKLEVAETRA IGPTLGQDAI NAGIQAGIIG TVLLFILIFA YYGFWMGLVA ALGLIYTAIL LLASISLLGA TLTLPGIAGL ILTLGAAVDG NVLSFERIKE ELKMGKKFRQ AIPGGFSHSI ITILDVNMCH LLAAAALYQY STGPVRGFAV MLALGVVTSV FSNLVFSRWL LELIGDRCEV RPPYWLWGTK IDFLGISRYV TAASLTLAVI AAGIVFVKGF NFGIDFTGGT AFTIRVPEGT RAEQIRSFLD NAGIAELRGA ESVITSLSSV NGNEFSVRVR QISEEQRIEL EKKFQESLQA TILQSETVGP AIGSELRRNT IFAVLVGLAL ILIYVAFRFD WVFGVASVIA VGHDVAIVAG MYSLLGLEFS IPTVAVLLTI VGFSINDSVI ISDRIRENLK IMRGRSYYEI VNASINQTLS RTLMTSLSTM LPILALLFLG GPVLRDFSLA IFVGFVVGTY SSIYVVSALV VWYKTLEQRR KATAKARSA
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