Gene Mrub_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1936 
Symbol 
ID8880045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1992447 
End bp1994726 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content62% 
IMG OID 
Productprotein-export membrane protein SecD 
Protein accessionYP_003507712 
Protein GI291296314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.609116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000107208 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAACC GCACGTGGAA AGCTGTTCTT CTCATCGGGC TACTCCTAGC CGCTATTGTG 
GGGCTGTTCC GCCCCTGGGA AGCCCGCAAC CCACAAAAAC CCTTGCTGCC CGCCGATGGC
CTGATCCGGC TGGGCCTCGA CCTACAAGGG GGCTTGCGCA TCACCCTCAA GGTGGCCGAG
CCCAACCCCG ACCCCTCTGT GGCTAAAACC GAGCTGGATG TGGCCCGCAC CGTTATCGAG
AACCGGGTCA ACGCCATCGG GGTGGCTGAG CCCCTGGTGC AGGTACAGGG CAACGATCGC
ATCATCGTGG AATTGCCGGG CCTGAAGCAG GATCAGCAGG AACGCGCCCT GGGCCTGATC
GGCCAGACCG CTAAGCTGGA GTTCCGCATC GTCAATCAGG GGGCCACCGG TACCACCGTG
GCACAGATCA ACGAGCAGCT ACGCAGCTCT GGCCTCAGCG GGGCCGCCCT GGCCGCCCGC
CGGGCCGAAC TTGAGAAAAA CCTATACAAG CTCGAGGACC TGGGCCCTCC CCTGCTCACC
GGTAGCGACC TGCGTACCGC CAATGCCTCT TTCGACCAGT TTGGACGTCC TCAGGTGGAT
ATGGAGTTCA CCCCCGAGGG GGCCAAAAAG TTCGAGGAGG TCACCCGGGC CAACGTGGGC
CGCCAGCTCG CCGTGGTGCT CGACGGTAAG GTCTACACCG CACCCAGCAT CCGCCAGGCC
ATTGCCGGCG GGCGGGCTGT AATCGAAGGA CTTTCCGGTG TGCAGGAAGC CTCTGACATC
GCCCTGGTGC TGCGCTCGGG CTCGCTGCCG GTCAAGCTGG AGGTAGCCGA GACCCGCGCC
ATCGGCCCCA CCCTCGGCCA GGATGCCATC AACGCGGGTA TCCAGGCAGG CATTATCGGC
ACAGTCTTGT TGTTTATCCT GATTTTCGCC TACTACGGCT TCTGGATGGG CCTGGTGGCC
GCCCTGGGCC TCATCTACAC CGCCATTCTG CTGCTGGCCT CCATCTCGCT GCTGGGGGCC
ACCCTCACCC TGCCGGGCAT CGCCGGCCTG ATTCTCACCC TGGGCGCTGC GGTAGACGGC
AACGTGCTCT CCTTCGAGCG CATCAAGGAA GAGCTCAAAA TGGGCAAGAA GTTCCGTCAG
GCCATACCGG GCGGCTTCTC CCATTCCATC ATTACCATCC TCGACGTCAA CATGTGCCAC
CTGCTGGCCG CGGCCGCCCT CTACCAGTAC AGCACCGGGC CGGTGCGGGG TTTTGCAGTC
ATGCTGGCGC TGGGCGTGGT GACCTCGGTC TTCTCCAACC TGGTCTTCAG CCGCTGGCTT
CTGGAGCTCA TCGGCGACCG CTGCGAGGTC AGGCCCCCCT ACTGGCTGTG GGGTACCAAA
ATCGACTTCC TGGGCATCTC GCGCTATGTT ACCGCGGCCT CCCTCACACT AGCTGTCATC
GCGGCCGGTA TCGTGTTTGT CAAAGGCTTC AACTTCGGCA TCGACTTCAC CGGCGGTACG
GCCTTTACCA TCCGCGTACC CGAGGGAACC CGGGCCGAGC AAATCCGCAG TTTTCTCGAT
AATGCCGGGA TCGCCGAGCT CCGCGGGGCC GAATCGGTGA TCACCTCGCT TTCCAGCGTG
AACGGCAACG AATTCTCGGT ACGGGTGCGG CAAATCAGCG AGGAACAGCG CATCGAGCTG
GAGAAAAAGT TCCAGGAAAG CCTGCAGGCC ACCATCCTTC AGTCCGAAAC GGTAGGCCCG
GCCATTGGTT CGGAGCTGCG CCGGAATACC ATTTTTGCGG TACTGGTGGG CCTGGCGCTG
ATTCTAATCT ACGTGGCCTT CCGCTTTGAC TGGGTGTTTG GCGTCGCCAG CGTGATTGCG
GTGGGGCACG ACGTGGCGAT TGTGGCGGGC ATGTACAGCT TGTTGGGGCT GGAGTTCTCC
ATCCCGACCG TAGCGGTTCT GCTCACCATC GTTGGTTTCT CGATTAACGA CTCGGTGATT
ATCTCGGATC GCATCCGCGA AAACCTCAAA ATCATGCGGG GCAGGAGTTA CTACGAGATT
GTGAACGCCT CCATCAACCA GACCCTCTCC CGCACCCTCA TGACCTCCCT CTCCACCATG
CTGCCCATCC TGGCCCTGCT CTTCTTGGGT GGGCCGGTGC TGCGCGACTT CTCGCTGGCT
ATCTTCGTGG GCTTTGTGGT GGGTACGTAC TCCTCCATCT ACGTGGTTTC GGCCCTGGTG
GTCTGGTACA AGACCCTCGA GCAGCGTCGC AAAGCCACCG CGAAAGCCCG CTCAGCCTGA
 
Protein sequence
MTNRTWKAVL LIGLLLAAIV GLFRPWEARN PQKPLLPADG LIRLGLDLQG GLRITLKVAE 
PNPDPSVAKT ELDVARTVIE NRVNAIGVAE PLVQVQGNDR IIVELPGLKQ DQQERALGLI
GQTAKLEFRI VNQGATGTTV AQINEQLRSS GLSGAALAAR RAELEKNLYK LEDLGPPLLT
GSDLRTANAS FDQFGRPQVD MEFTPEGAKK FEEVTRANVG RQLAVVLDGK VYTAPSIRQA
IAGGRAVIEG LSGVQEASDI ALVLRSGSLP VKLEVAETRA IGPTLGQDAI NAGIQAGIIG
TVLLFILIFA YYGFWMGLVA ALGLIYTAIL LLASISLLGA TLTLPGIAGL ILTLGAAVDG
NVLSFERIKE ELKMGKKFRQ AIPGGFSHSI ITILDVNMCH LLAAAALYQY STGPVRGFAV
MLALGVVTSV FSNLVFSRWL LELIGDRCEV RPPYWLWGTK IDFLGISRYV TAASLTLAVI
AAGIVFVKGF NFGIDFTGGT AFTIRVPEGT RAEQIRSFLD NAGIAELRGA ESVITSLSSV
NGNEFSVRVR QISEEQRIEL EKKFQESLQA TILQSETVGP AIGSELRRNT IFAVLVGLAL
ILIYVAFRFD WVFGVASVIA VGHDVAIVAG MYSLLGLEFS IPTVAVLLTI VGFSINDSVI
ISDRIRENLK IMRGRSYYEI VNASINQTLS RTLMTSLSTM LPILALLFLG GPVLRDFSLA
IFVGFVVGTY SSIYVVSALV VWYKTLEQRR KATAKARSA