Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1615 |
Symbol | |
ID | 8879720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1643674 |
End bp | 1646184 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | DNA topoisomerase I |
Protein accession | YP_003507397 |
Protein GI | 291295999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.830191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGATT CAACCTTAAT TGTTGTGGAA TCACCCGCCA AAGCCAAAAG CATTCAAAAA ATGCTGGGCG CTGGCTATGA GGTGCGGGCC AGCAAAGGTC ACATAGCCGA TCTGCCCGAG CACGAACTGG GGGTGGATAC CCAGGCCGAT TTTGCACCGC AGTACACTGT CAAAAAAGAC AAACAACCCA TTGTGGAAGA GCTCAAGCGG GCGGCTCGAG GCAAACGGGT GCTCATCGCC ACCGACCCCG ACCGCGAGGG TGAGGCCATC GGTTGGCACG TGGCCCGGCT GCTGGGCCTC AACCCGCAAA CCCCTCTACG GGTGGAGTTC CATGAGATTA CCCCCAAGGT GGTGCGGGCC GCCGTGCAGA AGCCACGCCC AATAGACCAA AGCCTGGTCG ATGCCCAGCA GGCCCGGAGG GTGCTGGATC GGCTGGTGGG CTACCAGCTC TCGCCGGTGC TGAGCATGGA GTTTCGGCGC CGGGCCCTAT CGGCGGGCCG GGTGCAATCG GTCGCATTGC GGCTGCTGGT TGAGCGGGAG CAGGAAATCG AGGCCTTTGT TCCTCAGGAA CACTGGAGCC TCGAGGGTCG GTTCGAGTCG GAGGGCCAGC AGTTTAAAGC CATGCTGTAC AGCCTGGGCT CGGAGCGGGT GCAGTCCGGC GATAAATTCC TGATCACCAG TGAAAAACAG GCCCAGGAGA TCGCCCGGCT CGCAAAAGAT GTCTCAGGTT ACCGCATCGG CAGCATCGAG CGCCGTGAGC GGCGCCGCAA TGCCCCTCCC CCTTTCATCA CCTCGACCCT CCAGCAAGCG GCCAGCAGCA GGCTGGGCTG GACAGCCAGC CGCACCATGC GCGTGGCCCA GAAGCTTTAC GAGGGGATTG ATCTGCCCGA GGGCACCGTG GGCCTCATCA CCTATATGCG CACCGACTCA ACTCGAGTCT CGCAGGAGGC CCTGGCCGAG GTGCGGGCCT TTATCCCGCG CCACTTTGGG CCGGCCTACC TGCCCGAGAA GCCCAATTTT TTTGCGGGCA AAAAAGCCGC CAACGCCCAG GACGCGCACG AGGCCATCCG TCCTACCTCG ACCGAACGAA CCCCAGACGC GCTGCGCAAG CACCTCAGCG ACGAGGAGTA CAGGTTATAC CAGCTTATCT GGCAGCGCTT TGTGGCCTCA CAGATGACCC CAGCGGTTTT TGATCAGACC ACCGTGACGG TGGTTGGGGC CAGTGGAACC CCCAGCGGCG ACCTGATCTT CCGGGCGGTG GGTTCGGTGC TGAAGTTCGA CGGTTACCTG CGGGTGTATG GGCGGGAAGA AGGCGACGAA GCCGAAAACC GGCTACCGCC CCTACAGGAA AACGCCAGCG CCCGCCTGCT GGAGGTTACG CCTGAGCAGC ATTTCACCGA GCCGCCCCCA CGGTACACCG ATGCCAGCCT GGTCAAAACC CTCGAGGAGA TGGGCATCGG GCGGCCTTCG ACCTACGCCC CCACCATCGA CACCCTCGAG CGCCGGGGTT ACCTCGAGCG CAGCGGCAAG TCGCTAAAGC CCACCCCGCT GGGCCGCGAG GTTACCGGCT ACCTGATTAA GAGCTTCCCC GACGTGGTGG CCTACGATTT TACCGCCCAG CTCGAGTCCC GCCTCGACGA GATCGAGGAG GGCAAAGCCG CCTGGCCCAA GGTGGTGCGT GAGTTTTACG AACCTTTCCT CAAGGACTTT GCCAAGGTGC CGCAAAAACT CTGCCCTAAA TGCGGGCGGC CCCTGGAGCT CAAGGTCTCG AGGTTCGGGC AGTTTTTGGG CTGCACCGGC TACCCCGAGT GCAAACACAC CGAACGCCTC GAGCTCAAAA AAGAACCCGA GCCCATCGGG GAAGCCTGCC CAGCCTGTGG GGAGGGTCAA CTGGTGCGCC GGCACGGGCG CTACGGCAGT TTTATTAGCT GTAGCCGCTA CCCCGAGTGC AAGTACACCC GCGACGAGGC CCCTTCCACC GGGATCGAGT GCCCCAAATG CCACGCGGGC GAGGTCGTGC AAAAAACCAG CAAGCGGGGC AAGCCTTACT ACCGCTGCAA CAACCCGGCC TGCGACTTTT TATCCTTCGA CCCGTTGCTG CCGGACAAGT GCCCCCTTTG CGGTTGGAAC GAGGTGGCCA AGGGTCGCAG CGGCAAGCGG GCCTGTACCA ATCCAGGCTG TGAACGCTAC GGCGGGCCCA AGCTCGAGGC TCTGAACCAG CGGCGCACAA AAAGCAGCAG TAAAACCTCC GGTACAGCCA AAAACAAGGT CAAGGACAGG GCCAAAGCCA GCGCCACCTG GGCCGACCTC GAGCCCTTCA TCACCAAAGC CGGCCTCACC CCCGAGCAAG CCGAGGTGGC CCGCCGCACC CAGGGCCAGC AAAAGCAGGT AGCTGCCGTG GCCAAAGCCC TCAATCAGCC CGAAGAGGCC GTGTTGAAAC TCTTCCGCCA GGCCATGTTC AAGCTGCGCA TGGAGTACGG CAAGGCCCGC AAAGAAGCGG TAAGCGCCTA G
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Protein sequence | MPDSTLIVVE SPAKAKSIQK MLGAGYEVRA SKGHIADLPE HELGVDTQAD FAPQYTVKKD KQPIVEELKR AARGKRVLIA TDPDREGEAI GWHVARLLGL NPQTPLRVEF HEITPKVVRA AVQKPRPIDQ SLVDAQQARR VLDRLVGYQL SPVLSMEFRR RALSAGRVQS VALRLLVERE QEIEAFVPQE HWSLEGRFES EGQQFKAMLY SLGSERVQSG DKFLITSEKQ AQEIARLAKD VSGYRIGSIE RRERRRNAPP PFITSTLQQA ASSRLGWTAS RTMRVAQKLY EGIDLPEGTV GLITYMRTDS TRVSQEALAE VRAFIPRHFG PAYLPEKPNF FAGKKAANAQ DAHEAIRPTS TERTPDALRK HLSDEEYRLY QLIWQRFVAS QMTPAVFDQT TVTVVGASGT PSGDLIFRAV GSVLKFDGYL RVYGREEGDE AENRLPPLQE NASARLLEVT PEQHFTEPPP RYTDASLVKT LEEMGIGRPS TYAPTIDTLE RRGYLERSGK SLKPTPLGRE VTGYLIKSFP DVVAYDFTAQ LESRLDEIEE GKAAWPKVVR EFYEPFLKDF AKVPQKLCPK CGRPLELKVS RFGQFLGCTG YPECKHTERL ELKKEPEPIG EACPACGEGQ LVRRHGRYGS FISCSRYPEC KYTRDEAPST GIECPKCHAG EVVQKTSKRG KPYYRCNNPA CDFLSFDPLL PDKCPLCGWN EVAKGRSGKR ACTNPGCERY GGPKLEALNQ RRTKSSSKTS GTAKNKVKDR AKASATWADL EPFITKAGLT PEQAEVARRT QGQQKQVAAV AKALNQPEEA VLKLFRQAMF KLRMEYGKAR KEAVSA
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