Gene Mrub_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1536 
Symbol 
ID8879639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1572191 
End bp1572631 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID 
Product50S ribosomal protein L13 
Protein accessionYP_003507318 
Protein GI291295920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.33501e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.222947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAG CAGTGTTCAA GACCTACGTG CCTGAACCCA AAGAACCCGG CTGGGTGCTC 
ATCGATGCCG CAGGCCAGCC CATTGGTCGG GTGGCTTCAA AAATTGCTGC AATACTGCGT
GGCAAGCACA AACCCGACTT CACCCCCAAC ATGGCCATGG GCGACTGCGT GGTGGTGATC
AACGCGGATA AGGTGGTGCT GACGGGCTCC AAACCCCGAA CCAAGGTCTA TACCCGCTAC
TCCGGTTACC CCGGCGGCCT GAAGCGAACC GTGGCTGCTG TGATGCTGGC CGAAAAGCCG
GTCAAGGCGG TGGAGCACGC GGTTAAGGGC ATGCTCCCCA AAGGCACCCT CGGTAACATC
ATGTTCCGCC GCTTGAAGGT TTACGCCGGA GCCACCCACC CCCATGCGGC CCAGAAGCCC
GTAAAGATGG AGGTTGAATA A
 
Protein sequence
METAVFKTYV PEPKEPGWVL IDAAGQPIGR VASKIAAILR GKHKPDFTPN MAMGDCVVVI 
NADKVVLTGS KPRTKVYTRY SGYPGGLKRT VAAVMLAEKP VKAVEHAVKG MLPKGTLGNI
MFRRLKVYAG ATHPHAAQKP VKMEVE