Gene Mrub_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1516 
Symbol 
ID8879617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1548957 
End bp1549955 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID 
ProductTransketolase central region 
Protein accessionYP_003507298 
Protein GI291295900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.349052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAG AGCGTGGTAC TCGAGTCCTG AACAACGTGC AGGCCATCAA CGAGGCCCTG 
GATCTGGCCC TGGCCAAAGA CGAACGGGTG GTGCTCTTTG GCGAGGACGT GGGCACCATG
GGCGGGGTGT TCCGGGCCTC GGACGGGCTC GCGCAAAAGT ACGGCGAAAA GCGGGTCTTC
GATACGCCCC TGGCCGAGAG CGGAATTGTG GGTTTCGGGA TTGGGCTGGC CATGGCCGGG
CTGCGCCCGG TGGCCGAGAT ACAGTTCGCC GGGTTCTTAT ACCCCGCCCT CGACCAGATT
CTTTCGCACC TGGGCCGGAT GCGCCACCGC ACCCGGGGCC GCTTTACCAT CCCCATGGTC
ATCCGCGCCC CTTACGGCGG CGGGGTCAAA ACCCCTGAGC AGCACGCCGA CAGCCCCGAG
GCCATCCTGG CCCACGTGCC GGGGGTCAAG ATGGTGATCC CCTCCTCGCC CGAGCGGGCC
AAGGGACTGC TGCTGGCGGC CATCGAAGAT CCCGACCCGG TGTTTTTCCT GGAGGCCATC
AAGCTCTACC GGGGCGTGAA GGCCGAGGTG CCGGAAGGCT ACTACACCCT ACCCCTGGGC
CAAGCCCGGG TGGTGCGGGA GGGCAACGCC GCCAGCCTGT TCTGCTACGG CGGGATGGTG
GAGGTCTGCC TCAAGGCCGC CGAGGTGGCC GCGCGGGAGG GGGTGGAGCT GGAGGTGGTG
GACCTCGAGA CCCTAATACC CCTGGACACC CCCACCATCC TGGCCTCGGT GCAGAAAACC
GGGCGCGCGG TGGTGGTCTA CGAGGCCATG CGCACGGGGG GCTTTGGCGC GGAAATCGCC
GCCCGCATCG CCGAGGAGGC CCTGGACTAC CTGCAAGCCC CCATCCTGCG GGTGGCCGGC
TGGGACGCCC CCTACCCCCC GTTCAGCGCG GTGGAAAACT TCTACCGCCC GGACGCCAGG
CGGGTTCTGG AGGCGGTGCG TAGGGTGCTG GAACACTAA
 
Protein sequence
MIAERGTRVL NNVQAINEAL DLALAKDERV VLFGEDVGTM GGVFRASDGL AQKYGEKRVF 
DTPLAESGIV GFGIGLAMAG LRPVAEIQFA GFLYPALDQI LSHLGRMRHR TRGRFTIPMV
IRAPYGGGVK TPEQHADSPE AILAHVPGVK MVIPSSPERA KGLLLAAIED PDPVFFLEAI
KLYRGVKAEV PEGYYTLPLG QARVVREGNA ASLFCYGGMV EVCLKAAEVA AREGVELEVV
DLETLIPLDT PTILASVQKT GRAVVVYEAM RTGGFGAEIA ARIAEEALDY LQAPILRVAG
WDAPYPPFSA VENFYRPDAR RVLEAVRRVL EH