Gene Mrub_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1330 
Symbol 
ID8879426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1363917 
End bp1364888 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content65% 
IMG OID 
Product3,4-dihydroxyphenylacetate 2,3-dioxygenase 
Protein accessionYP_003507112 
Protein GI291295714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00370431 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.041902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TGCCCAACAT CATCCGCATC GGCCACGGGG TGTTCTACGT GACCGATCTG 
GAGCGTTCGC GCCACTTCTA CGTAGATTTA CTCGGCCTGA ATGTGCTGCA CGAAAGCCAG
AGCGCCCTGT ACCTACGCGG CACCGAGGAC CGCGAGTGGA CCCTCAAGCT CGAGCTGGCC
CCCGAACCCG GCGTCAAGCA CCTGGGCTAC CGGGTGGCCG GCGAACTGGA TTTGCAACTC
CTGGCCGAGC TGGCCCAGAC CCTGGGCCTC CCCCACCGCT GGGAGAGCGA GCAGGATCGG
CCCAGAATGC TGCGCTTGCA AGACCCCTTT GGGGTTCCGG TGGCCTTCTA TGCCGAAAGC
CAGAAGTACC CCTGGCTCCT GCAACGCTAC GACCTGCACA AAGGCCCCGG CATCCAGCGC
ATTGACCACA TCAACGTGAT GACGCCGCAG GTGGAGGCCA TGACCCGCTG GTACATGGAT
AAGCTGGCCT TCCGCCTCTC GGAGTACACC GAGGACGACG ACGGCCGAAT CTGGGCGGCC
TGGATTCACC GCAAGGGCAA CGTACACGAC CTGGCCCTCA CCAACGGCAC CGGCCCCCGG
CTGCACCACT TCGCCTACTG GATGCCCGAT GCCATGAGCA TCATCCGGGC CTGCGACATT
CTGGCCGGGG CCAGAGAGAC CGAGGCCATC GAGCGCGGGC CAGGACGCCA CGGCGTCTCC
AACGCCTTCT TCCTGTACCT GCGCGACCCC GACGGCCACC GCATCGAGCT GTACACCTCC
GACTACAGCA CGGTAGACCC CGATTTCGAG CCCATCCGCT GGAGCCTCAA CGACCCCCGC
CGCCAGACCT TGTGGGGGGC CAAAACCCCC AAGAGCTGGT TCCTGGAGGG CTCGCTTTTG
GAGGCCTTCG AGGGCGGCTG GGTAGAGCCG CAGGAGTCGG AGTTACAGGG GCTGCCACAG
CACGTGATCT GA
 
Protein sequence
MTQMPNIIRI GHGVFYVTDL ERSRHFYVDL LGLNVLHESQ SALYLRGTED REWTLKLELA 
PEPGVKHLGY RVAGELDLQL LAELAQTLGL PHRWESEQDR PRMLRLQDPF GVPVAFYAES
QKYPWLLQRY DLHKGPGIQR IDHINVMTPQ VEAMTRWYMD KLAFRLSEYT EDDDGRIWAA
WIHRKGNVHD LALTNGTGPR LHHFAYWMPD AMSIIRACDI LAGARETEAI ERGPGRHGVS
NAFFLYLRDP DGHRIELYTS DYSTVDPDFE PIRWSLNDPR RQTLWGAKTP KSWFLEGSLL
EAFEGGWVEP QESELQGLPQ HVI