| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1302 |
|---|
| Symbol | |
|---|
| ID | 8879397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 1333873 |
|---|
| End bp | 1335819 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | acetate/CoA ligase |
|---|
| Protein accession | YP_003507084 |
|---|
| Protein GI | 291295686 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.394021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0628269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA TCGAAGCGGT TCTAAAGGAG GAGCGGGTTT TTCAACCCTC GGAGGATTTT
CGGCAGGCGG CCCGTATTCG TCGGCTCGAG GACTACGAGG CCCTTTACCG CGAGAGCCTC
CAAGAGCCCG AAAAGTTCTG GAGCCGGGTA GCCTCGGAGC TACACTGGTT CAAGCCCTGG
GATAAGGTGC TCGAGTGGAA CCCCCCCAAC GCCAAGTGGT TCATCGGGGG GCAGCTCAAC
CTTTCCTACA ACTGCCTGGA TCGCCACCTC GCAACCCGTG GCAACAAGGC TGCCATCATC
TTTGAGGGGG AGCCGGGCGA CTCGCGCATC CTCACCTACC AGCAATTGCA CCGCGAGGTG
AGCAAGTTTG CCAACGTGCT TAAAGGGCTG GGGGTGCGGA AGGGCGACCG TGTGACCATC
TACCTGCCCA TGATCCCCGA GGCTGCCATC GCCATGCTGG CCTGTGTGCG CATTGGGGCG
GTGCACTCGG TGGTGTTTGG GGGCTTCTCG GCCTCGGCCC TGGCCGACCG GATTAATGAC
GCGCAGGCCA AGGTGCTCAT CACCGCCGAC GGTGGCTGGC GGCGGGGGAA CGTGGTACCG
CTCAAGGTCA ACAGCGACGA GGCTTTAGCC GATGCCAAAT CCGTTGAGCA GGTGGTGGTG
GTGCGGCGCA CCGGCCACGA GGTTCCTATG GAGCGGGGCC GCGACCACTG GTACCACGAG
CTGATGGCCT CGGCCTCACC CGACTGCCCC CCCGAGCCCA TGGACGCCGA AGACCCTCTT
TTCATCCTGT ATACCTCGGG TTCCACCGGC AAGCCCAAAG GGGTTTTGCA CACCACCGGG
GGCTACTCGG TGTATACCTA CCTGACCGCC CAGTACATCT TCGACCTCAA GGAGTCCGAT
ACCTACTTCT GCACGGCGGA TGTGGGCTGG ATTACCGGTC ACAGCTATGT GGTGTATGGG
CTGCTGCAAA ACGGGGCCAC CACCCTGATG TACGAAGGCG CGCCCAACAC ACCGGACGAG
GGCCGCATCT GGAGCATCAT TGAAAAATAC AGTGTGAGCA TCCTGTACAC CGCGCCCACG
GCCATTCGCG CCTTTATGAA GTGGGGCGAG CAGTGGCCCC TCAAGTACAA CCTCTCGAGC
CTCCGCCTGC TGGGCTCGGT AGGGGAGCCC ATCAACCCCG AGGCCTGGTT CTGGTACTAC
AAGGTGATCG GCAAGGAGCG CTGCCCCATC GTGGATACCT GGTGGCAGAC CGAGACCGGC
GGGATCATGA TCACCACCCT GCCGGGTGTG CACCCCATGA AGCCCGGTCA TGCCGGCAAG
CCCTTCTTTG GGGTACAGCC CGAAATTGTA GACACCTCGG GCCAGCCGGT GAACAACCCC
GACGAGGGCG GCCACCTGAT CATCCAGAAA CCCTGGCCCT CCATGCTGCG CACGGTCTGG
GGCGACCCGG AGCGCTTCGA GCGGCAGTAT TTTTCCCAGT ACCCCGGCAA CTACTTCACC
GGCGACGGGG CCCGGCGCGA CGAAGACGGC TATTACCTGA TTCTGGGCCG GGTGGACGAC
GTGCTCAACG TTTCGGGTCA CCGCCTGGGC ACCATGGAGG TCGAAAGCGC CCTGGTCTCG
CACCCGGCGG TGGCTGAGGC GGCGGTGGTG GGGCGGCCCG ACCCCATCAA AGGTGAGGGC
ATTGTGGCCT TTGTAACCCT CAAGACCGGT TTCAGCCCCA GCGCTGAGCT GGCCCAGGAA
CTCAAGGCCC ATGTGGTCAA GGCCATTGGG GCCATTGCCC GCCCCGACGA GATTCGCCTG
ACCGATGCCC TGCCCAAAAC CCGCTCCGGC AAGATTATGC GCCGCCTGCT GCGGCAGGTG
GCCTCGGGTG AGGAGATCAA GGGGGATACC AGCACCCTCG AGGATCGGGG GGTGGTGGAG
CGGTTGAAAT CCACCCCCGC GCAGTAG
|
|---|
| Protein sequence | MEKIEAVLKE ERVFQPSEDF RQAARIRRLE DYEALYRESL QEPEKFWSRV ASELHWFKPW
DKVLEWNPPN AKWFIGGQLN LSYNCLDRHL ATRGNKAAII FEGEPGDSRI LTYQQLHREV
SKFANVLKGL GVRKGDRVTI YLPMIPEAAI AMLACVRIGA VHSVVFGGFS ASALADRIND
AQAKVLITAD GGWRRGNVVP LKVNSDEALA DAKSVEQVVV VRRTGHEVPM ERGRDHWYHE
LMASASPDCP PEPMDAEDPL FILYTSGSTG KPKGVLHTTG GYSVYTYLTA QYIFDLKESD
TYFCTADVGW ITGHSYVVYG LLQNGATTLM YEGAPNTPDE GRIWSIIEKY SVSILYTAPT
AIRAFMKWGE QWPLKYNLSS LRLLGSVGEP INPEAWFWYY KVIGKERCPI VDTWWQTETG
GIMITTLPGV HPMKPGHAGK PFFGVQPEIV DTSGQPVNNP DEGGHLIIQK PWPSMLRTVW
GDPERFERQY FSQYPGNYFT GDGARRDEDG YYLILGRVDD VLNVSGHRLG TMEVESALVS
HPAVAEAAVV GRPDPIKGEG IVAFVTLKTG FSPSAELAQE LKAHVVKAIG AIARPDEIRL
TDALPKTRSG KIMRRLLRQV ASGEEIKGDT STLEDRGVVE RLKSTPAQ
|
|---|
| |