| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1283 |
|---|
| Symbol | |
|---|
| ID | 8879378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 1307798 |
|---|
| End bp | 1308991 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | glycine betaine/L-proline ABC transporter ATPase subunit |
|---|
| Protein accession | YP_003507065 |
|---|
| Protein GI | 291295667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.624021 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTA TACGTGTAGA AAACCTATAC AAGATCTTCG GCCCAAAGGC CGGACAAGCC
CTGGAAATGG TGCAGGGGGG CACCGATAAA GACACGCTTT TTCAAAAGAC CCGCCACGTG
CTGGGCCTGA ACAGGATCAA CCTGGAGGTG AAGCAGGGCG AATTTTTTGT GATCATGGGG
CTTTCGGGGT CGGGCAAGTC CACCCTGCTT CGGGTGCTCA ACCGCCTGAT CGAGCCCACA
GCAGGTCGGG TTTTGGTCGG TGATACCGAG GTAACCACCC TCCCGCACAA AGAGCTTCTG
CGTTTCCGCC AGGACACCTT CGGTATGGTT TTCCAGCACT TTGCTTTGCT TCCTCACTAC
AACATTCTGC GCAACGTGGC TTTCCCGCTG GAGCTCAAAG GGCTTTCCCG TAAGGAGCGG
GAGGAGCAGG GCATGGCCTG GTTAGAGCGG GTGGGGCTTT CCGGCTATGA GAAGCATTAC
CCAGGGCAGT TGTCTGGTGG ACAGAAACAG CGGGTTGGCC TGGCGCGGGC CCTTTGCGCA
AACCCTCCCA TCCTGCTCAT GGACGAGGCC TTCAGCGCGC TGGATCCCCT GATCCGCAAG
GAGATGCAGG ACGAACTTTT GCGTCTGCAG CAAGAGTTAA AAAAGACCAT CGTCTTTGTA
ACCCACGACC TGGATGAGGC CATGCGCCTG GGAGACCGTA TCGCCATCAT GCGGGACGGG
GAGGTGGTGC AGGTAGGAAC CGCGGAGGAG ATTCTGGCCC GCCCTGCAGA CGATTATGTG
GCCGCCTTTT TGTCCGGTGT TAATCCCGCC AAAATCTACA AGGTGGAGGA GCTGGTGCAG
GAACCCGTGA CCGTGGTGCT GGAACGGGAG GGCCTGCGCT CAGCCCTGCG CAAGATGGGC
CAGGCCGGTG CTGTGAATGC CTATGTGGTA AATCGTAGCG GATTTTTTCA GGGGATGGTG
CGAGCTGAAA AGTTGGCCGA AGCGCTTAAG GCCGAAGGGG AGCGTGGTGG GCTGGAGAGC
CTCCTGGAAC CCCTACCCGC GCTTTCGCCC GGTCAGACCC TGGAAGAGGC CCTGCCGCTG
TTCAGTGAAA CCGCGCTGCC CTTGCCCATA CTGGACGAGA AAGGGCGGCT CCTAGGGGTG
GTGACGCGGG GCCGGTTGAT CGCGGCCATG GCGGGGCGTT ACGTGCCTCA ATAG
|
|---|
| Protein sequence | MSFIRVENLY KIFGPKAGQA LEMVQGGTDK DTLFQKTRHV LGLNRINLEV KQGEFFVIMG
LSGSGKSTLL RVLNRLIEPT AGRVLVGDTE VTTLPHKELL RFRQDTFGMV FQHFALLPHY
NILRNVAFPL ELKGLSRKER EEQGMAWLER VGLSGYEKHY PGQLSGGQKQ RVGLARALCA
NPPILLMDEA FSALDPLIRK EMQDELLRLQ QELKKTIVFV THDLDEAMRL GDRIAIMRDG
EVVQVGTAEE ILARPADDYV AAFLSGVNPA KIYKVEELVQ EPVTVVLERE GLRSALRKMG
QAGAVNAYVV NRSGFFQGMV RAEKLAEALK AEGERGGLES LLEPLPALSP GQTLEEALPL
FSETALPLPI LDEKGRLLGV VTRGRLIAAM AGRYVPQ
|
|---|
| |