Gene Mrub_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1211 
Symbol 
ID8879306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1223164 
End bp1224927 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content64% 
IMG OID 
Productoligoendopeptidase pepF/M3 family 
Protein accessionYP_003506994 
Protein GI291295596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.02852e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.797975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CCATCACCGA ACTTCCAACC TGGGATCTGG ACGCCTTGTT TCCGGGCTTC 
GAATCTGAAA AGTTCAGGTC TACCTGGAAC CAGGTGGCCG GCCAGTTGCA GGATTTACAG
GAGTTCATCG AAAGGCACCG CATAGGCCGG GACGATGCCG CCACCGACCG CGCCACCTTC
GAGGCCCTGC TGGACAAGCT GAACACCTTC GGCGATACCC TGGGGCCTCT CTTTGCCTAT
GTGCTGATGC GGGTGGACAC CGATAGCGCC GACGCGGAGG CCCAGGCCAA GCTTTCCGAG
CTCGAGCTTC TCCATCTAGA GTTCCAGAAA CTGCGCCCCC GCCTGCAACG CTGGCTGGCT
GGCCTCGAGG CCGAAGCGGT GGGCGCCGGC GATTACCGGA TTCTCATCGA GGAAGCCAAA
GTGCTGGCCC AGCACCTGAT GTCGGAAGCA GAAGAGGTGC TGGCCGCCGA GCTTTCGCTC
TCGGGGGGGC GGGCCTGGGT CAAGCTGCAC GGCAACCTGA CCAGCCAGAT TACGGCGGTG
TTGAATGGCG AGGAGCAGCC CATCACGGCG GTGCGCAACC TGGCCATGCA CCCCGACGAG
GCGGTGCGCA AAGCCGCCTA CGAAGCCGAG CTAAAGGCCT GGAAAGCCAA CGAAGTGGCC
CTGGCAGCAG CCCTGAACGG CTACAAGGGC GAGGTCTCAA CCCTCAACCG CAAGCGCGGC
TGGGAAGACG ACCTGGCCCC GGCCCTGTTT GAAAACCGCA TTGGCCGCAA GACCCTCGAG
GCCCTGCAAC AGGCCATGGT GGAGAGCCTG CCCCACTGGC GGCGTTACTT TGCGGCCAAA
GCCAGGGCCC TGGGCAAGGA GCGGCTGGAC TGGTGGGATC TGTTCGCCCC CATCGTGCGG
CCCGGCCAGA CCCCCAAAAA GTGGAGCTGG GAAGAGGGCC GGCGCTTTAT TGTGGAGCAC
CTGTCGGGCT TCTCGCAGGC CGCTGCCGAT CTGGCCGAGC GGGCCTATGC CGAAGGCTGG
ATGGACGCTC CGCCCCGCAA GGGCAAGGTG GGCGGGGCCT ACTGCACCCC GGTGGGGCAG
GGGGCCTCAC GCATCCTGCT CAACCACGAG AATAGCTTTG AGTCTATTTC CACCCTGGCC
CACGAGCTGG GCCACGCCTA CCACAACTAC TGCTTGCGCG AGGTGCCCTA TCTGTTGCGC
CAGGAGCCCA TGACCCTGGC CGAGACGGCC TCCATCATGA ACGAGACCGT AATCGGGGAG
GCCGCGCTTA GGGTGCTGCC GCCCGCCGAC CAACTAGGGG TGCTCGAGGG CGGTTTGCAA
AGTGCGGCCC AGGTGATCGT GGACATTCAC TCGCGCTTCC TGTTCGAACA GGCGGTGTTT
GCCCGGCGGC GGGCGCGGGA GCTATCGGCC GAGGAGTTTT GTGGCTTGAT GCTCGAGGCC
CAGCAGGCCA CCTATGGCGA GGCCCTGGCT ACCTACCATC CCTACATGTG GGCGGTAAAG
GGCCACTACT ACGGCTCCAA CTTCTATAAC TTTCCCTATG CCTTTGGGCT TTTGTTTGGG
CTGGCCCTCT ACCAGCGCTA CCGGCAGGAA GGCCCGGGGT TTGTGGCCCG CTACGAGGAG
CTGCTGGCCT CGGTGGGCAG GTACCCCGCC GAGCAACTGG CGGCCCGCTT TGGCTTCGAT
CTGGAGTCGG TGGCCTTTTG GCGGGAGGGG ATGGCCGTGC TGCTGGCCCG CATCGAGCGT
TTCGAGGCGT TGCTAAACCA ATGA
 
Protein sequence
MSQAITELPT WDLDALFPGF ESEKFRSTWN QVAGQLQDLQ EFIERHRIGR DDAATDRATF 
EALLDKLNTF GDTLGPLFAY VLMRVDTDSA DAEAQAKLSE LELLHLEFQK LRPRLQRWLA
GLEAEAVGAG DYRILIEEAK VLAQHLMSEA EEVLAAELSL SGGRAWVKLH GNLTSQITAV
LNGEEQPITA VRNLAMHPDE AVRKAAYEAE LKAWKANEVA LAAALNGYKG EVSTLNRKRG
WEDDLAPALF ENRIGRKTLE ALQQAMVESL PHWRRYFAAK ARALGKERLD WWDLFAPIVR
PGQTPKKWSW EEGRRFIVEH LSGFSQAAAD LAERAYAEGW MDAPPRKGKV GGAYCTPVGQ
GASRILLNHE NSFESISTLA HELGHAYHNY CLREVPYLLR QEPMTLAETA SIMNETVIGE
AALRVLPPAD QLGVLEGGLQ SAAQVIVDIH SRFLFEQAVF ARRRARELSA EEFCGLMLEA
QQATYGEALA TYHPYMWAVK GHYYGSNFYN FPYAFGLLFG LALYQRYRQE GPGFVARYEE
LLASVGRYPA EQLAARFGFD LESVAFWREG MAVLLARIER FEALLNQ