Gene Mrub_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1185 
Symbol 
ID8879280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1195217 
End bp1196560 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content59% 
IMG OID 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_003506968 
Protein GI291295570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000645588 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAA CCCCATTTGG CGCAGCGCAG ACGGTGACCG GAAGTTGCCA CCTGGTGGAG 
CACCAGAATT ACCGATTGCT GCTGGACTGT GGCGCTTATC AGGGTGCCGA TGAAGAACGC
AACGAAGAGC CTTTTGGTTT TGATCCCAGA ACCGTTGACG CGGTGCTGAT CTCCCATGCC
CACAACGATC ACATCGGCCG CCTACCCATG CTAATACGCC AGGGATTTGC GGGCCGGGTG
TACGTTACAG AACCAACCCG GTTGATACTG CCGGTGATCC TCGAGGATGC CCTAAAGCTT
ATGCAAGAAG AGCGCGAGCG CTTGGTGCGC AAGGGCCGTG AGGCGCCCCC ATTGCCCTGG
AACGAAAGCG ATCTGGCCGA ACTTTATACC CGTCTGGAGG TGGTCACCTA CTACCAGACG
CAGAGCCTGG GGCCGTTCAG CTACCGCCTG CGCGACGCGG GGCATCTTCC CGGCAGCGCC
TTTATTCAGC TCGAGGCCGC CGGCAGATCC CTGATTTTTA GCGGTGACCT GGGCCACCGA
CGGAAAGATG TGTTGGTGGA TCCCGACTAT CCGGCCATGG TTGACCTGGT TTTGTGTGAA
GGGACTTATG GAGACCGTGC GCATCGTCCA TTTGCTGCAA CCCTGGAAGA GTTTTCCGGT
ATTTTGAGGA GCGTGCTGAG CCAGAATGGC AAGGTCTTCA TCCCGTCGTT TGCCCTCGAG
CGTACCCAGG AGGTGCTGTT TTACATCCGC GAGCTCGAGC AGCGCGGGGC CATTCCCAGC
GTTCCGGTGT TTGTGGACTC GCCCATGGCC TCCAAAATCA GCGAGATTTA TCCTAAAGTG
CGCGACTTTT TCAGCAGCGA GGTTCAGCGC CTTTATGCCC AGGGTCTCGA CCCTTTCCGC
CCCCAGCGGC TCGAGTACAC CCACAGCGTG GAGGAGTCCA AGGCCCTTAA TCTGATGCAG
GGCCCTATGG TTGTTATCGC TGGCAACGGA ATGCTTTCCG GGGGGCGTAT ACTACACCAC
CTGCGCCATG GTCTGCCCGA TAGCAAAAAC GCTGTGATTA TCACGGGCTA CCAGCCCCGG
GGTGGCCTGG GAGAATTGCT GATCAATGGT GCTGAAACGG TACGGATGTT CGGCGAAACC
GTACAAGTAC GGGCCAGAAC CCATACCCTG GGTGGTTTCT CGGGCCACGC AGGCCGTGAT
GAATTGCTCG ACTGGTTGGA CGGCGAGCAG CGCGTAGCCC TGGTGCATGG TGAAGTGGAA
AAACTGCAGG CGCTGGGACA GGCCTTGCGG GAGCGCGGCA AGGTAGTGTT TCTGGGAGAG
TGGGGCAAGG CCATCGAGGT CTAG
 
Protein sequence
MRITPFGAAQ TVTGSCHLVE HQNYRLLLDC GAYQGADEER NEEPFGFDPR TVDAVLISHA 
HNDHIGRLPM LIRQGFAGRV YVTEPTRLIL PVILEDALKL MQEERERLVR KGREAPPLPW
NESDLAELYT RLEVVTYYQT QSLGPFSYRL RDAGHLPGSA FIQLEAAGRS LIFSGDLGHR
RKDVLVDPDY PAMVDLVLCE GTYGDRAHRP FAATLEEFSG ILRSVLSQNG KVFIPSFALE
RTQEVLFYIR ELEQRGAIPS VPVFVDSPMA SKISEIYPKV RDFFSSEVQR LYAQGLDPFR
PQRLEYTHSV EESKALNLMQ GPMVVIAGNG MLSGGRILHH LRHGLPDSKN AVIITGYQPR
GGLGELLING AETVRMFGET VQVRARTHTL GGFSGHAGRD ELLDWLDGEQ RVALVHGEVE
KLQALGQALR ERGKVVFLGE WGKAIEV