Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1143 |
Symbol | |
ID | 8879234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1155276 |
End bp | 1157009 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003506926 |
Protein GI | 291295528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0057674 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.283725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TCTTGATCCT AGGAATGCTA GCCCTGGCCG GGTTGGCCCT GGCCCAGCCC AAGGTATTCA AGGGCACCGA GCCGGGTCGT GCCGGTGGAG CTTATCGCAT CACCGCGATC TCCGACCCGC GCACCTGGAA CCCCTTCGTA GCCCGCGAAA CCTCTTCCAC CGATATCATC AGCCTGTTCC TGCCTACCCT TACCGGCTAC AGCCCCTACA CCCAGGCCCC TGAGGGCAAC CTGGCCAAGT CGTGGGAGGT TCGCAACAAC GGCCTGACCG TAATCTTCCG CCTGCGTGAA GGGGCCCGCT GGTCGGACGG CCAGGCCATC GACGCTGACG ATGTGATCTT CAGCGCGACC GTGCACGCCG ATCAACGGGT CAACTCCAAC GCACGCAGCA GCTTCATCCT CGATGGGCAG CCCATCCGCT GGACCAAAGT AGATCAGTAC ACGGTGCGGG CCGACTTCCC CAAGCCCTAC GCACCGGCCC TGATCCAGGG TTGGTACATT GCGCCGGAGC ACATCTTTGG CCCGGCCTAC CGCGCGGGCG TGCAGCAGCT CCAGGCCCTG TGGAACCTGG ACACCCCGCC GGCCCAGGTG GTCTCGGGCG GCCCCTTCAA GCTTGACAGC TACGTCAAGG GCGAGCGGGT GGTGCTGGTG CGAAACCCCA ACTACTGGGG GGTGGACGAT CGCAACAACC CGGTGGCCTA CCTCGAGCGC TACACCGTAC AGGTCGTGCC CGACCTTAAC GCCCAGCTCG CGCGCTTCCT GGCGGGTGAG GCCGACACCT TTGCGGCTGC TAACGCCGAC CAGGTGGCCC AGGTGCTGGA GCGCATCCGG GGCAACCGTC TGCGGGCTGA AATTTTCCCC AACGCCGACG TAACCCTTGG CACCAACTTC ATCGTCTTCA ACTGGAACCA CAAAGACCCC TTCAAGGAAA GCCTCTTCCG CCAGGTGAAG TTCCGCCGGG CCATGGCCCA CCTGATGGAC AAGAAGTCCA TGATCGAGGT GGCCCTGGGC GGCCTGGGTC AGCCCCAGTG GAGCCCCATC TCCATCCCCA ATAAGGCCTT CTTCACCGAC GATGTGGTCA AGTACGAGTT CAGCCCGCAA AAAGCCGCTC AACTCCTGGC TGAGCTGGGC TTCCGTAGCA AGAACCGCGA TGGCTGGCTG GTGAACGCCC AGGGCAAGGT GCTGGAGTTC AACCTGGTCA CCAACCAGGG CAACAACGTG CGCGAGCGCA TCGCCCAGAT CTTCCGCGAC GAGGCCCGCA AGATCGGGGT CAAGGTGGAG TACCGGCCCA TCGACTTCAA CGAACTGGTG CGCCAGCTCA CCAGCCCGGC CGCCGACGGC ACCCGCGACT TCGACGCCAT CCTGATCGGC CTGACCGGTG GTATCGAGCC GGCCTTCAGC CGCAACGTCT GGGAGCTCAA CGGCCCCCTG CACATGTGGA ACCTGGGTAT CGGCGGTAAA AACCCGGCTA AGGTCGAGGC CTTCGAGGTG CTGATTGATA CCCTAATGAA GCGGGGTGCG ACCACCCTCG ACCAGGCCCA GCGCCGCCAG ATCTACGTGC AATTCCAGAA GGTGGTGGCC GAGAACCTGC CCATCATCTA CACCGTGGCA CCGGCCTACA ACCCGGCCCG GCTGACCCGC CTGGGTGGTA TGTTCCCCAA AGAGCAGATC AACTCCATCA CCGGGCAGGC GCCGTACATC GAGACCGTTT TTGCTAAGGA GTGA
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Protein sequence | MKKLLILGML ALAGLALAQP KVFKGTEPGR AGGAYRITAI SDPRTWNPFV ARETSSTDII SLFLPTLTGY SPYTQAPEGN LAKSWEVRNN GLTVIFRLRE GARWSDGQAI DADDVIFSAT VHADQRVNSN ARSSFILDGQ PIRWTKVDQY TVRADFPKPY APALIQGWYI APEHIFGPAY RAGVQQLQAL WNLDTPPAQV VSGGPFKLDS YVKGERVVLV RNPNYWGVDD RNNPVAYLER YTVQVVPDLN AQLARFLAGE ADTFAAANAD QVAQVLERIR GNRLRAEIFP NADVTLGTNF IVFNWNHKDP FKESLFRQVK FRRAMAHLMD KKSMIEVALG GLGQPQWSPI SIPNKAFFTD DVVKYEFSPQ KAAQLLAELG FRSKNRDGWL VNAQGKVLEF NLVTNQGNNV RERIAQIFRD EARKIGVKVE YRPIDFNELV RQLTSPAADG TRDFDAILIG LTGGIEPAFS RNVWELNGPL HMWNLGIGGK NPAKVEAFEV LIDTLMKRGA TTLDQAQRRQ IYVQFQKVVA ENLPIIYTVA PAYNPARLTR LGGMFPKEQI NSITGQAPYI ETVFAKE
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