Gene Mrub_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1143 
Symbol 
ID8879234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1155276 
End bp1157009 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content63% 
IMG OID 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003506926 
Protein GI291295528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0057674 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.283725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TCTTGATCCT AGGAATGCTA GCCCTGGCCG GGTTGGCCCT GGCCCAGCCC 
AAGGTATTCA AGGGCACCGA GCCGGGTCGT GCCGGTGGAG CTTATCGCAT CACCGCGATC
TCCGACCCGC GCACCTGGAA CCCCTTCGTA GCCCGCGAAA CCTCTTCCAC CGATATCATC
AGCCTGTTCC TGCCTACCCT TACCGGCTAC AGCCCCTACA CCCAGGCCCC TGAGGGCAAC
CTGGCCAAGT CGTGGGAGGT TCGCAACAAC GGCCTGACCG TAATCTTCCG CCTGCGTGAA
GGGGCCCGCT GGTCGGACGG CCAGGCCATC GACGCTGACG ATGTGATCTT CAGCGCGACC
GTGCACGCCG ATCAACGGGT CAACTCCAAC GCACGCAGCA GCTTCATCCT CGATGGGCAG
CCCATCCGCT GGACCAAAGT AGATCAGTAC ACGGTGCGGG CCGACTTCCC CAAGCCCTAC
GCACCGGCCC TGATCCAGGG TTGGTACATT GCGCCGGAGC ACATCTTTGG CCCGGCCTAC
CGCGCGGGCG TGCAGCAGCT CCAGGCCCTG TGGAACCTGG ACACCCCGCC GGCCCAGGTG
GTCTCGGGCG GCCCCTTCAA GCTTGACAGC TACGTCAAGG GCGAGCGGGT GGTGCTGGTG
CGAAACCCCA ACTACTGGGG GGTGGACGAT CGCAACAACC CGGTGGCCTA CCTCGAGCGC
TACACCGTAC AGGTCGTGCC CGACCTTAAC GCCCAGCTCG CGCGCTTCCT GGCGGGTGAG
GCCGACACCT TTGCGGCTGC TAACGCCGAC CAGGTGGCCC AGGTGCTGGA GCGCATCCGG
GGCAACCGTC TGCGGGCTGA AATTTTCCCC AACGCCGACG TAACCCTTGG CACCAACTTC
ATCGTCTTCA ACTGGAACCA CAAAGACCCC TTCAAGGAAA GCCTCTTCCG CCAGGTGAAG
TTCCGCCGGG CCATGGCCCA CCTGATGGAC AAGAAGTCCA TGATCGAGGT GGCCCTGGGC
GGCCTGGGTC AGCCCCAGTG GAGCCCCATC TCCATCCCCA ATAAGGCCTT CTTCACCGAC
GATGTGGTCA AGTACGAGTT CAGCCCGCAA AAAGCCGCTC AACTCCTGGC TGAGCTGGGC
TTCCGTAGCA AGAACCGCGA TGGCTGGCTG GTGAACGCCC AGGGCAAGGT GCTGGAGTTC
AACCTGGTCA CCAACCAGGG CAACAACGTG CGCGAGCGCA TCGCCCAGAT CTTCCGCGAC
GAGGCCCGCA AGATCGGGGT CAAGGTGGAG TACCGGCCCA TCGACTTCAA CGAACTGGTG
CGCCAGCTCA CCAGCCCGGC CGCCGACGGC ACCCGCGACT TCGACGCCAT CCTGATCGGC
CTGACCGGTG GTATCGAGCC GGCCTTCAGC CGCAACGTCT GGGAGCTCAA CGGCCCCCTG
CACATGTGGA ACCTGGGTAT CGGCGGTAAA AACCCGGCTA AGGTCGAGGC CTTCGAGGTG
CTGATTGATA CCCTAATGAA GCGGGGTGCG ACCACCCTCG ACCAGGCCCA GCGCCGCCAG
ATCTACGTGC AATTCCAGAA GGTGGTGGCC GAGAACCTGC CCATCATCTA CACCGTGGCA
CCGGCCTACA ACCCGGCCCG GCTGACCCGC CTGGGTGGTA TGTTCCCCAA AGAGCAGATC
AACTCCATCA CCGGGCAGGC GCCGTACATC GAGACCGTTT TTGCTAAGGA GTGA
 
Protein sequence
MKKLLILGML ALAGLALAQP KVFKGTEPGR AGGAYRITAI SDPRTWNPFV ARETSSTDII 
SLFLPTLTGY SPYTQAPEGN LAKSWEVRNN GLTVIFRLRE GARWSDGQAI DADDVIFSAT
VHADQRVNSN ARSSFILDGQ PIRWTKVDQY TVRADFPKPY APALIQGWYI APEHIFGPAY
RAGVQQLQAL WNLDTPPAQV VSGGPFKLDS YVKGERVVLV RNPNYWGVDD RNNPVAYLER
YTVQVVPDLN AQLARFLAGE ADTFAAANAD QVAQVLERIR GNRLRAEIFP NADVTLGTNF
IVFNWNHKDP FKESLFRQVK FRRAMAHLMD KKSMIEVALG GLGQPQWSPI SIPNKAFFTD
DVVKYEFSPQ KAAQLLAELG FRSKNRDGWL VNAQGKVLEF NLVTNQGNNV RERIAQIFRD
EARKIGVKVE YRPIDFNELV RQLTSPAADG TRDFDAILIG LTGGIEPAFS RNVWELNGPL
HMWNLGIGGK NPAKVEAFEV LIDTLMKRGA TTLDQAQRRQ IYVQFQKVVA ENLPIIYTVA
PAYNPARLTR LGGMFPKEQI NSITGQAPYI ETVFAKE