Gene Mrub_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1118 
Symbol 
ID8879208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1123928 
End bp1125130 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content63% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003506902 
Protein GI291295504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.04817e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG GTTTTTGGAT TGGGGCTGTG GCGGCCTTGA GCCTGCTAGG CTCCGCTATG 
GCGCAAGGTA AGCTGACGGT CTGGACTCAT TACGGCGGCC CTGAGCTGGC CTGGCTCAAG
CAGACCGCGG CCAGCTTTGC CAAAAGCAGC GGTACCCAGG TTGAGGTGGT GGAGGTACCT
TTTAGCGATA TCCAGAATAA GTTCATCCTG GGGGCGCCCC AGGGTCAGGC GGCCGACCTG
GTGGTGAGCA TCCCCCACGA CTGGGTGGGG GCGATGGCGG CTGCGGGGGT GCTCGAGCCT
ATGGGCAAGT ACGCTACCCG TAGCTACATT CAAAGCCTCT CGGATGTGGC GGTGGATGCC
CTCACCTACC GCAACCAGCT TTTCGCGCTG CCCATGTTCG CCGAGGCCGT GGCCCTCATC
TACAACAAAA AGCTGGTCAA GGAAGCCCCC AAGACCTGGG ACGAGTTCCT GAAAATTGCC
CAGGACAACA CCAAGGGCAA CTCCTTTGGC TTCCTCTACG ACCTGGCCAA CCCCTACTTC
AACTACGGCT GGTTCACGGC CTATGGGGCC AGCGTGTTTG GCCGCACAGC CCAGGGCGTG
GATGCCAGCC AGACCCGTCT GGGCGGGGAT GCGGGCAACC GCGCGGTGAG CTTTATCAAA
GACCTGCGCT ACCGCTACCG GCTGGTTCCC GAGGGGGTGG ATTACGGCGT GGCCGATAGC
GCCTTCAAGG AAGGGGCGCT GGCCATGATT CTCAACGGCC CCTGGGCGGT TGGCGAGTAT
AAAAAAGCCA ACATCGACTT TGGCATCGCC CCCATGCCCA ACCCCCCCGG CGGTGGGCAG
TGGCGCCCGT TTGTGGGGGT GCAGGGCGTG GCCATGAACG CCTACTCGCG CAACAAGACC
GCGGCGGCTA ACTTTGCCAA GCTGCTGGTG AGTACCCAGA ACCAGGTGGC CTTTAACAAG
GCCGGTGGCC GCCTGCCGGT TTCCAAGCAG GCCGTGCAGC AACTGCGCAA CGACCCGGTG
GTGGCCGGTT TCTCGGCGGT GATCGCCCTT GGCACCCCCA TGCCCAACAT CCCCGAGATG
GGTAAGGTCT GGGGGCCCTG GGGCAACGCG CTTTCCCAGG CGGTGCAGAA GTCGGACACC
AACGTGGCCC AGATTGTGAC CGCTATGGTG GCTGAGATTA ACCGCGGTCT TTCCGGCCGA
TAA
 
Protein sequence
MKRGFWIGAV AALSLLGSAM AQGKLTVWTH YGGPELAWLK QTAASFAKSS GTQVEVVEVP 
FSDIQNKFIL GAPQGQAADL VVSIPHDWVG AMAAAGVLEP MGKYATRSYI QSLSDVAVDA
LTYRNQLFAL PMFAEAVALI YNKKLVKEAP KTWDEFLKIA QDNTKGNSFG FLYDLANPYF
NYGWFTAYGA SVFGRTAQGV DASQTRLGGD AGNRAVSFIK DLRYRYRLVP EGVDYGVADS
AFKEGALAMI LNGPWAVGEY KKANIDFGIA PMPNPPGGGQ WRPFVGVQGV AMNAYSRNKT
AAANFAKLLV STQNQVAFNK AGGRLPVSKQ AVQQLRNDPV VAGFSAVIAL GTPMPNIPEM
GKVWGPWGNA LSQAVQKSDT NVAQIVTAMV AEINRGLSGR