Gene Mrub_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1117 
Symbol 
ID8879207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1122971 
End bp1123672 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003506901 
Protein GI291295503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.23483e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.996665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTT TGCGTGGGAA AGTGGCCCTG GTTACCGGGG CTTCCTCTGG AATTGGCCTC 
GAGGTCGCTA AGCAACTGGT GGCTAACGGT GTGGGGGTTG GTTTGTTTGC CCGAAGCCAG
GCCAGGCTGG CCCGCCTGGC GGCGGAACTG GGTAACAGCC TGGCCCTGCC GGGCGACGTG
ACCCGCTACG AAGACCTGGA GCGGGCTGTG CAGCAGCTCG AGGCCCATTT TGGCGGCCTG
GACTTTCTGA TCAACAATGC TGGAATAGGT ATTTTCAAAC CCGTGCACGA ACTGACCCCA
GAGGAGTGGC AGCAGGTGCT GCAAACCAAC CTCACCGGCT CCTTCTATGC CACCAAAGCC
GCCGTACCGG CCATGCAGCG CCGCGGCGGG GGGTACATCA TCAACATAGG TTCGCTGGCT
GGGAAAAACG CCTTTGCCAA CGGAGCCGCT TACAACGCCA GCAAGTTTGG CCTGCTGGGC
TTTTCCGAAG CGGCTATGCT GGATTTGCGC TACCACGGCA TTCGGGTGAG CAGCATCCTG
CCCGGTTCGG TGGACACGCC CTTTGCGGGC AACAGCACCG GGGCCCCCTG GAAGATTCAG
CCGCAGGATA TTGCGCAGGC CGTGCTGTAC CTGCTGCAAA GCGATCCCCG CATCATCCCC
AGCCAGCTGG ATCTGCGGCC CAGCCAGCCA CCCAAAAAAT AA
 
Protein sequence
MSGLRGKVAL VTGASSGIGL EVAKQLVANG VGVGLFARSQ ARLARLAAEL GNSLALPGDV 
TRYEDLERAV QQLEAHFGGL DFLINNAGIG IFKPVHELTP EEWQQVLQTN LTGSFYATKA
AVPAMQRRGG GYIINIGSLA GKNAFANGAA YNASKFGLLG FSEAAMLDLR YHGIRVSSIL
PGSVDTPFAG NSTGAPWKIQ PQDIAQAVLY LLQSDPRIIP SQLDLRPSQP PKK