Gene Mrub_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1089 
Symbol 
ID8879178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1093877 
End bp1095514 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content63% 
IMG OID 
Productchaperonin GroEL 
Protein accessionYP_003506873 
Protein GI291295475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.83154e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0318123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAA TGCTAGTTTT TGATGAAGCT GCACGCCGTA GCCTCGAGCG CGGCATGAAC 
GCGGTAGCCA ATGCTGTAAA GGTGACCCTG GGCCCCCGTG GGCGCAACGT GGTGCTGGAG
AAGAAATTCG GCAGCCCCAC CATTACCAAA GACGGGGTTA GCGTAGCCAA GGAGGTCGAG
CTGGAGGACC ACCTCGAGAA CATCGGCGCC AAGCTGATGA TCGAGATCGC CTCCAAGACC
AACGACATCA CCGGTGACGG TACCACCACT GCTACCGTGC TGGGCCAGGC CATCGTGCGT
GAGGGTCTGC GCAACGTGGC CGCCGGGGCC AACCCCCTCG ACCTCAAGCG CGGCATTGAG
AAGGCCGTGG ATGTGGCCAT CAAGAGCATC CAGGAGCTGG CCGTACCCGT CAACGACCGC
AAGGCCATCT TCGAAGTGGC TAGCGTATCG GCCAACAACG ACGCCGAGAT CGGCAACCTG
ATCGCCGATG CCATGGAGAA GGTGGGCCGC GAGGGTGTCA TCACCGTTGA GGAGTCCAAG
AGCCTCGACA CCGAGCTCAA CTTCGTGGAA GGGTATCAGT TCGACAAGGG CTACATCTCG
CCCTACTTCG TCAACAACCC CGACACGATG GAGGCCCAGC TCGATGAGCC CTTCATCCTG
ATCACCGAGA AGAAGATCAG CAACGTGCGC GAGCTGCTGC CGGTGCTCGA GCAGGTTGCC
CAGACCGGCA AGCCCCTGCT CATCATTGCC GAAGACGTCG AGGGTGAGGC CCTGGCAACC
CTGGTGGTCA ACCGCCTGCG CGGTACCCTC AACATCGCTG CTGTCAAGGC CCCTGGCTTT
GGTGACCGCC GCAAGGAGAT GCTCAAAGAC CTGGCGGCCA TCACCGGTGG TACCGTGATC
AGCGAAGAGC TGGGCTTCAA GCTGGAGAAC GCCACCCTCT CCATGCTGGG CCGCGCCGAG
CGGGTGCGCA TCAACAAGGA TGAGACCACC GTGGTGGGCG GCAAGGGCAA GAAGGAAGAC
ATCGAGGCCC GCATCAACGG CATCAAGAAG GAGCTCGAGA CCTCCGACAG CGAGTACGCC
AAGGAGAAAC TGCAGGAGCG CCTGGCCAAG CTGGCTGGTG GCGTGGCTGT GATCCGCGTG
GGTGCTGCTA CCGAGACCGA GCTCAAGGAG AAGAAGCACC GCTACGAGGA CGCCCTCTCC
ACGGCCCGCG CCGCAGTGGA GGAAGGCATC GTGCCCGGTG GTGGTGTGGC CCTGCTGCGC
GCCGTGCCCG CCATCAAGAA CCTGATCAAG GAGCTCGATG GTGATGAGGC CACCGGTGCC
AAGATTGTGC TGCGCGCCAT CGAAGAGCCC GCCCGCCAGA TTGCTGCCAA CGCCGGCTAC
GAGGGCAGCG TGGTGGTCAA CAACATCCTC AGCAAGAAAG AAAAGAACTA CGGCTTCAAC
GCGGCCACCG GTGAGTACGG CGACATGATG GAGTGGGGCA TCGTGGACCC GGCCAAAGTG
ACCCGTACGG CCCTGCAGAA CGCCGCTTCC ATCGGCTCGC TGATCCTCAT GACCGAGGCT
GTGGTGGCCG AGAAGCCCGA AGAGAAGAAG GCCCCTGCTG CGCCCGCTGG CGGCATGGGT
GGCGACATGG ACTTCTAA
 
Protein sequence
MAKMLVFDEA ARRSLERGMN AVANAVKVTL GPRGRNVVLE KKFGSPTITK DGVSVAKEVE 
LEDHLENIGA KLMIEIASKT NDITGDGTTT ATVLGQAIVR EGLRNVAAGA NPLDLKRGIE
KAVDVAIKSI QELAVPVNDR KAIFEVASVS ANNDAEIGNL IADAMEKVGR EGVITVEESK
SLDTELNFVE GYQFDKGYIS PYFVNNPDTM EAQLDEPFIL ITEKKISNVR ELLPVLEQVA
QTGKPLLIIA EDVEGEALAT LVVNRLRGTL NIAAVKAPGF GDRRKEMLKD LAAITGGTVI
SEELGFKLEN ATLSMLGRAE RVRINKDETT VVGGKGKKED IEARINGIKK ELETSDSEYA
KEKLQERLAK LAGGVAVIRV GAATETELKE KKHRYEDALS TARAAVEEGI VPGGGVALLR
AVPAIKNLIK ELDGDEATGA KIVLRAIEEP ARQIAANAGY EGSVVVNNIL SKKEKNYGFN
AATGEYGDMM EWGIVDPAKV TRTALQNAAS IGSLILMTEA VVAEKPEEKK APAAPAGGMG
GDMDF