Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_1089 |
Symbol | |
ID | 8879178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 1093877 |
End bp | 1095514 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | chaperonin GroEL |
Protein accession | YP_003506873 |
Protein GI | 291295475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000383154 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0318123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAA TGCTAGTTTT TGATGAAGCT GCACGCCGTA GCCTCGAGCG CGGCATGAAC GCGGTAGCCA ATGCTGTAAA GGTGACCCTG GGCCCCCGTG GGCGCAACGT GGTGCTGGAG AAGAAATTCG GCAGCCCCAC CATTACCAAA GACGGGGTTA GCGTAGCCAA GGAGGTCGAG CTGGAGGACC ACCTCGAGAA CATCGGCGCC AAGCTGATGA TCGAGATCGC CTCCAAGACC AACGACATCA CCGGTGACGG TACCACCACT GCTACCGTGC TGGGCCAGGC CATCGTGCGT GAGGGTCTGC GCAACGTGGC CGCCGGGGCC AACCCCCTCG ACCTCAAGCG CGGCATTGAG AAGGCCGTGG ATGTGGCCAT CAAGAGCATC CAGGAGCTGG CCGTACCCGT CAACGACCGC AAGGCCATCT TCGAAGTGGC TAGCGTATCG GCCAACAACG ACGCCGAGAT CGGCAACCTG ATCGCCGATG CCATGGAGAA GGTGGGCCGC GAGGGTGTCA TCACCGTTGA GGAGTCCAAG AGCCTCGACA CCGAGCTCAA CTTCGTGGAA GGGTATCAGT TCGACAAGGG CTACATCTCG CCCTACTTCG TCAACAACCC CGACACGATG GAGGCCCAGC TCGATGAGCC CTTCATCCTG ATCACCGAGA AGAAGATCAG CAACGTGCGC GAGCTGCTGC CGGTGCTCGA GCAGGTTGCC CAGACCGGCA AGCCCCTGCT CATCATTGCC GAAGACGTCG AGGGTGAGGC CCTGGCAACC CTGGTGGTCA ACCGCCTGCG CGGTACCCTC AACATCGCTG CTGTCAAGGC CCCTGGCTTT GGTGACCGCC GCAAGGAGAT GCTCAAAGAC CTGGCGGCCA TCACCGGTGG TACCGTGATC AGCGAAGAGC TGGGCTTCAA GCTGGAGAAC GCCACCCTCT CCATGCTGGG CCGCGCCGAG CGGGTGCGCA TCAACAAGGA TGAGACCACC GTGGTGGGCG GCAAGGGCAA GAAGGAAGAC ATCGAGGCCC GCATCAACGG CATCAAGAAG GAGCTCGAGA CCTCCGACAG CGAGTACGCC AAGGAGAAAC TGCAGGAGCG CCTGGCCAAG CTGGCTGGTG GCGTGGCTGT GATCCGCGTG GGTGCTGCTA CCGAGACCGA GCTCAAGGAG AAGAAGCACC GCTACGAGGA CGCCCTCTCC ACGGCCCGCG CCGCAGTGGA GGAAGGCATC GTGCCCGGTG GTGGTGTGGC CCTGCTGCGC GCCGTGCCCG CCATCAAGAA CCTGATCAAG GAGCTCGATG GTGATGAGGC CACCGGTGCC AAGATTGTGC TGCGCGCCAT CGAAGAGCCC GCCCGCCAGA TTGCTGCCAA CGCCGGCTAC GAGGGCAGCG TGGTGGTCAA CAACATCCTC AGCAAGAAAG AAAAGAACTA CGGCTTCAAC GCGGCCACCG GTGAGTACGG CGACATGATG GAGTGGGGCA TCGTGGACCC GGCCAAAGTG ACCCGTACGG CCCTGCAGAA CGCCGCTTCC ATCGGCTCGC TGATCCTCAT GACCGAGGCT GTGGTGGCCG AGAAGCCCGA AGAGAAGAAG GCCCCTGCTG CGCCCGCTGG CGGCATGGGT GGCGACATGG ACTTCTAA
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Protein sequence | MAKMLVFDEA ARRSLERGMN AVANAVKVTL GPRGRNVVLE KKFGSPTITK DGVSVAKEVE LEDHLENIGA KLMIEIASKT NDITGDGTTT ATVLGQAIVR EGLRNVAAGA NPLDLKRGIE KAVDVAIKSI QELAVPVNDR KAIFEVASVS ANNDAEIGNL IADAMEKVGR EGVITVEESK SLDTELNFVE GYQFDKGYIS PYFVNNPDTM EAQLDEPFIL ITEKKISNVR ELLPVLEQVA QTGKPLLIIA EDVEGEALAT LVVNRLRGTL NIAAVKAPGF GDRRKEMLKD LAAITGGTVI SEELGFKLEN ATLSMLGRAE RVRINKDETT VVGGKGKKED IEARINGIKK ELETSDSEYA KEKLQERLAK LAGGVAVIRV GAATETELKE KKHRYEDALS TARAAVEEGI VPGGGVALLR AVPAIKNLIK ELDGDEATGA KIVLRAIEEP ARQIAANAGY EGSVVVNNIL SKKEKNYGFN AATGEYGDMM EWGIVDPAKV TRTALQNAAS IGSLILMTEA VVAEKPEEKK APAAPAGGMG GDMDF
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