Gene Mrub_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1087 
Symbol 
ID8879176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1092540 
End bp1093340 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content65% 
IMG OID 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003506871 
Protein GI291295473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000199948 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0146207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTA CCTCAACGGC CAACCCCCGC ATCAAGGCGG CTGCTGAACT CAAAGAACGC 
AAGAACCGCG AGCGAACGGG TACGTTTTTG ATTGAAGGCG CTCGCGAAAT CGAGCGGGCG
TTGGCAGCCG GCCTCGAGGT CATCGAAGCC TACTGCGGCG AGCCTCTCAG CCCCGAGGAG
GCCCGCGCCG TTGCTCATTT ATCTCGAGCC CTCGGCCTGG AGGTGCACGA GCTTTCCGAG
GCAGCCCTCA AGAAAATCAG CAGCCGCGAG CACCCGGCCG GGGTGCTGGC GGTGGCCCGG
ATGCCCCGCC CTTCCCTTGC GGCCTTCCAG CCTTCTTCCA ATGCTTTGCT GCTGGTCTCG
GTGGGGCTGG AAAAACCCGG CAACCTGGGG GCTTTGCTGC GCTCAGCCGA CGCCGCCGGG
GCCGATGCGG TGCTGGTGGC GGGGGGGGTA GACCTCTACA GCCCCCAGGT CATCCGCAAC
TCCACCGGGG TGGTGTTTTC CTTGCCTACC TTTGCCGCCC CCGAGCAGGC CGTGCTGGAC
TGGTTACTGC AGCACAATAT CCCCATAGTA GCCACCACCC CCCACACCCA CCAAACCTAC
TGGGACGTGG ATCTGCGGGG GCCTGTGGCC ATTGTGCTGG GCACGGAACA CCAGGGGTTG
AGCCAAACCT GGCTCGAGCG GGCCGCACGA AAGGTCAGGA TTCCCATGCA GGGCCAGGCC
GACAGTCTTA ACGTCTCGGT AACAGCCGCC CTGATGCTAT ATGAGGCTGT ACGGCAGCGC
CAACCCCGCC CGTTGCCTTA G
 
Protein sequence
MRITSTANPR IKAAAELKER KNRERTGTFL IEGAREIERA LAAGLEVIEA YCGEPLSPEE 
ARAVAHLSRA LGLEVHELSE AALKKISSRE HPAGVLAVAR MPRPSLAAFQ PSSNALLLVS
VGLEKPGNLG ALLRSADAAG ADAVLVAGGV DLYSPQVIRN STGVVFSLPT FAAPEQAVLD
WLLQHNIPIV ATTPHTHQTY WDVDLRGPVA IVLGTEHQGL SQTWLERAAR KVRIPMQGQA
DSLNVSVTAA LMLYEAVRQR QPRPLP