| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_1013 |
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| Symbol | |
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| ID | 8879102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | - |
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| Start bp | 1004292 |
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| End bp | 1006820 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_003506798 |
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| Protein GI | 291295400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000167268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.298358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TTTGGAAGTT GGCTCTGGTA AGCGTGCTTG TGCTGATAGC AGCCTGCAAC
GGGCAAAGGC CAAACGGAAC CGCTCAGATT GTCGTAGACA ATACCCTTAC ACCTACCCAG
GCTACGATAC CCGGCCCGGA CGGCCCACGC CCGGTGGCCC GCATGGTGGG TGAGAGTGGT
ATCGCAATGG ATTTTGTTCT TGGAGAGCTG ATAATCAGCA CCGACGACCC TGCCAAGCTC
AACGCCTTCC TTAGCCGCTG GGGTGGGCAG GTGCTGAGCG AGACCGAAAA GGTGGGTGAC
GCACCCAAAA CATATCAAGT GCGCCTCAAC CCTTCCGGTG CCCAGGTGGA GGCCATACTC
CAGCGGCTCA ACCAGTCGCT ACCAGATTTG AAGGGAAGGT TTAGCACCTC GAGCCCAGAA
GCAGCCCAGC TTTTGGCAGT AGCCCTGAGC GAAGCCAACC AGGAAAAGAT GACCGTCACA
CCTAACTTTG TGGTGCTACC TGCTGCCATT GCAGACGGCA GCACCGCCGA GGCCCCCACC
CGCTCGAGCC TTTCCCCCGC CGATATTCCC TACACCCCCA ACGCCTTCAA CTGGACTTAC
ATGAACCGGG GCAGCGCCCA GGACATCGGG GTGGGCGAGG CCTGGCGGCT GTTAGAGCGG
GCTGGACGCT TGAGCAACCG GGTTCGCATC ATGATTTTGG ATGGTGGCTT CGCACTCAAC
AACGACTTCC CCGCCACCCG TCAGGTGGTG GGGAGCTGGA ACGAGTCCAG CCTACTCCAG
TGCTCCGGGG GCAACTCCTG CCCTTGGCAC GGTACGCACG TCACCACCGC AGCCATGGGT
CGTCCAGACA ATGGCTTCGG GGTTGCTGGC CCAGCAGGCC CGGTTGGAGA GCTTTTGGCA
GTTCCTTTTC AAGGAGACTT TATTGGTATC ATCTCCACCC TCGAGCGCAT CATTACCGCT
ACCCTGTTCG GGAACCCCAA GATCATCAAT ATGAGCTTTG GTTTTGAGCT TGACCTGGGC
TGGGACATCG CAGTTAAGGT GGCTTGCTTA GGGTTGTGCC CCTCTCCCAG CGAGGTGATG
GATGGCTTTG CGGTAGCAGT TTCAGCAACC GGCAAACTCC TTTTTGCTGC TGCTGGCAAC
GAGGGTAAGG ACGTAGACAA CGGTGGTGGC ATCGAGGGTT CAACCCATAT CCCTTGTGAA
CTACGCTCGG TAATCTGCGT AGGCGGGATG GCCCACGACA GCACCGCCCG CGACCTTGGC
TCCAACTTCG GAACCAAGCG AGATGACAAC AGCGTAGACA TCTATGGGCC TTTCTGGGTA
TGGGCCGGCC CGGATCCTGA GAGCCCTGCC AATGAGGCCC GGCTTCGAGC AGGTACCAGC
TACTCCTCTC CCTTCGTGGC CGGCGTAGCC GCGCTGGTCT GGGCTGCCAA CCCCTCTTTG
AGCGCCAGCC AGGTCTGGGC TATTCTGCGC GACACCGCCC ATGTGGGGGG GGTGGGGGTC
GGAGGCTTTG AGCGCCGGGT AAACGCTTTT GCAGCGGTCT CCAGGGCGCT GGAAGTAGGC
AGCAGCGGCC CTAGCGTGGC CCTGAGCGCT GCCAGCACTG CCGACCTCAA CCGCGAGTGG
AGCATCACCG CCAACGTTAC CGACTTTGCC GGGAACAACT GCCTCCCTGT CTTCTGCCCG
CTAACCTTTG ACCCAGCCCC AACCCGAACC GTTGGCAACA CCGCCTATTA TCGCTTCAAT
ACTGCCGCGA GCCGCACCAT ACGGGTGACC ACCCGCGATC TGCTGGGCCG CGAGGGCAGC
GCCACGCGCG AGGTCACCGT CATCAACACC GCGCCGGTGG TTCGCATTGA CGCACCCTCC
AATGGCGACT CGTTCTACCA GGGCCAGACC GTCAACCTGG TCGGCACTGC CACCGACCTC
AACGAAGGCC CCGACCCCGG CCCTGGCCCC ATTGCGTGCC GCTGGGAGGG CAGCGCCGCC
GACGGTTTCC CCCGCACCGG CTGCAACCTC TCGGTTACCT TTAGCACGAC CGGCTCGCGC
ACCCTTACGC TTCGGGCCAC CGACCCGCAG GGCCTGAGCA GCACTGCCAG TGTAACCATC
AACATCACGC TCCCGCCGGC CAACCTGCCC CCCAACATTA ACACCTTCGG CCCGCTGTCC
CCTTCAGAAC CCAACTACTC TGGCGGATTC TCCTGGAACA CCACCTTTAC CGCCCCCGCC
AGTGCCACCG ACCCCGAAGG CAACAACCCC ATCACCTACA TCTGGCGGGC CACCTCCTAC
CGCCCCGATA ACGATAGCGT GGTCTGGCGC AGCAACGTGG TGCTGAGCAC CTCCACCACC
AGCGGCAACC TGAGCTGGAC GCCGAGCACC AACAACCCCA GCAATCTGCT AGGTGATGAA
TCCACCTTTG GTAACGCCTG CTATAACGGC CAACTGGTGC GCCTCGAGCT GGTCGCCCGC
GATTCCCTGG GCCACGAGAG CACCCGGAGT TTCGCCGCCA TTCGGATATA CCGCTGCATC
GTAATCTAG
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| Protein sequence | MKHLWKLALV SVLVLIAACN GQRPNGTAQI VVDNTLTPTQ ATIPGPDGPR PVARMVGESG
IAMDFVLGEL IISTDDPAKL NAFLSRWGGQ VLSETEKVGD APKTYQVRLN PSGAQVEAIL
QRLNQSLPDL KGRFSTSSPE AAQLLAVALS EANQEKMTVT PNFVVLPAAI ADGSTAEAPT
RSSLSPADIP YTPNAFNWTY MNRGSAQDIG VGEAWRLLER AGRLSNRVRI MILDGGFALN
NDFPATRQVV GSWNESSLLQ CSGGNSCPWH GTHVTTAAMG RPDNGFGVAG PAGPVGELLA
VPFQGDFIGI ISTLERIITA TLFGNPKIIN MSFGFELDLG WDIAVKVACL GLCPSPSEVM
DGFAVAVSAT GKLLFAAAGN EGKDVDNGGG IEGSTHIPCE LRSVICVGGM AHDSTARDLG
SNFGTKRDDN SVDIYGPFWV WAGPDPESPA NEARLRAGTS YSSPFVAGVA ALVWAANPSL
SASQVWAILR DTAHVGGVGV GGFERRVNAF AAVSRALEVG SSGPSVALSA ASTADLNREW
SITANVTDFA GNNCLPVFCP LTFDPAPTRT VGNTAYYRFN TAASRTIRVT TRDLLGREGS
ATREVTVINT APVVRIDAPS NGDSFYQGQT VNLVGTATDL NEGPDPGPGP IACRWEGSAA
DGFPRTGCNL SVTFSTTGSR TLTLRATDPQ GLSSTASVTI NITLPPANLP PNINTFGPLS
PSEPNYSGGF SWNTTFTAPA SATDPEGNNP ITYIWRATSY RPDNDSVVWR SNVVLSTSTT
SGNLSWTPST NNPSNLLGDE STFGNACYNG QLVRLELVAR DSLGHESTRS FAAIRIYRCI
VI
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