Gene Mrub_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1004 
Symbol 
ID8879093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp996824 
End bp998389 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content67% 
IMG OID 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003506789 
Protein GI291295391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.925519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.368038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTTGG AGGAGGCCAG CCAGCTTGAA GCCCAGTTTG CTACGCACCT GACCCGCATG 
GTGCCCGAAG GCAGCCTGGT TGCTGCCGTA TCGGGCGGGG GCGACTCGGT AGCGCTTTTG
CTTTTGCTCA CCTCCACCCC CCGCAAGGTG GTGGTGGCCC ACCTCGATCA CTCATTGCGG
CCTGAGTCAG GCCAGGACGC GCTGTGGGTC AAAGCCCTGG CCGAGCGCCT GGGCTATCCT
TTTGAATCGG AAAAACTGGA CGTAGCCAAA ATCGCTGCGG AGCGCGGGGG CAACCTCGAG
GCCACCGCCC GCGAGCTGCG CTACGGCTTT CTGGCTAAGG TAGCCAAAAA GCACCAGGCC
CAGGCCATTC TGACCGCCCA CACCGAGGAC GATCAGGCCG AAACGGTGCT GCTGCAGCTT
TTACAGGGCA CCGGAAGGGG TCTGGGCATG CGCCCCAAGC GGGGGAAGGT GGTGCGGCCC
TTGCTCGAGC TCAGCCGCAG CACCTTACGG GCTTATCTGA GGTGCAAGCA GCAGGACTGG
CTCGAGGACA TCTCCAACGC CGACACCTCG CTGGATCGGA ACTTCCTTCG CCACGAAATT
TTCCCCCGGC TCAAAGCGCG TTTTCCCCAG ACCCAGACCG CTCTGGCCCG CTTCGCCGCC
ATCTCCCAGC TCGACGACGA AGCCCTCGAC CCCCTGGCCG AACAGCTCCT GCTGCGCGAC
CGGCGCTGGC CCTGCCCGGC CTACCGCGTC GCACCACTGC TACAGGCCCC CACCGGCCTG
CGCCGGCGGG CTTTGCGGCA GATCCTCGAG CACCTCAGGC TACGCCCCGA GATGGGCTGG
GTGGTGCAGC TCGAGCGGGC CCTGCACGGC GAGGCCTTTA CCCTGCCCGA AGGCTGGCAG
GTGCGCCGGC GCGATGGCAC CCTGTTTCTG ATTCCCCCGG TGATCGACAC CTTCCCCCCC
TGGCGGGGCT CGAGGCTCCC CCTGCCCGGC GATCTGATCG ACCTGCCCAA GGGTCTGGTG
CGGCTGGTGG ACTTCTTTAC CGAACACAGC CTCCCACCCG AGCTTAAGCA GAACTGGCCG
GTGCGCGCAG TGGGCAACGT GGTGCGTGAG GTCTGGAACC TCTGGCCCGA GTCGGAGGAT
CTGGAGCACA TGCGCAGCGC CCTCGAGCAG GCCCGGCTGG CCCAGCAAGC AGGCGAAGTG
CCCATCGGGG CCGTGGTGGT CTGGGATGGT GAGGTGCTGG CCGAGGCCCA CAACCAGGTC
GAGCAGCAGT GCGATGCCAC CGCCCACGCC GAGCTGCTGG CCCTCCAGCA GGCCCTCCAC
AAACGGCACA GCAAGGTGCT GCCCGGCGCT ACCGTGTATG TAACCCTCGA GCCCTGCCCT
ATGTGCTTCG GCGCGCTGAT GGAAGCCCAG GTGCGGCGGG TGGTGTATGC GGTGGAGAAC
CTGAAGGCCG GGGCGGTGAC GGTGCATCGC ATGAAACCCC CCTTTGAGTG GGAAGGGGGC
TGGCTCGAGC GCGAATCGGC TAAACTGCTG CGGGACTTCT TCTCCCAGAA GCGCGTGCAG
CCCTGA
 
Protein sequence
MELEEASQLE AQFATHLTRM VPEGSLVAAV SGGGDSVALL LLLTSTPRKV VVAHLDHSLR 
PESGQDALWV KALAERLGYP FESEKLDVAK IAAERGGNLE ATARELRYGF LAKVAKKHQA
QAILTAHTED DQAETVLLQL LQGTGRGLGM RPKRGKVVRP LLELSRSTLR AYLRCKQQDW
LEDISNADTS LDRNFLRHEI FPRLKARFPQ TQTALARFAA ISQLDDEALD PLAEQLLLRD
RRWPCPAYRV APLLQAPTGL RRRALRQILE HLRLRPEMGW VVQLERALHG EAFTLPEGWQ
VRRRDGTLFL IPPVIDTFPP WRGSRLPLPG DLIDLPKGLV RLVDFFTEHS LPPELKQNWP
VRAVGNVVRE VWNLWPESED LEHMRSALEQ ARLAQQAGEV PIGAVVVWDG EVLAEAHNQV
EQQCDATAHA ELLALQQALH KRHSKVLPGA TVYVTLEPCP MCFGALMEAQ VRRVVYAVEN
LKAGAVTVHR MKPPFEWEGG WLERESAKLL RDFFSQKRVQ P