Gene Mrub_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0603 
Symbol 
ID8878680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp578512 
End bp580311 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter-like protein 
Protein accessionYP_003506391 
Protein GI291294993 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.131331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCTGG ATAGGAGAAC TTTTCGATGG CGCCTGGTTG GGCTGGCTTT GCGCCAGGTG 
ATCCAGGCGG CCCCCCTCGA GGCCACCCTG CTTTTGCTGC TGCTGGCCCT GGGGGGGCTG
GTGCCGGTGG GGGTTCTGGG CTTTACCCGC GCCCTGGTGG ACGGCCTGGT GGCCGGTCTG
GGGGAGGGCG TGTGGGGCCC CTGGCTCTGG TGGCCCCTGC TGGGGCTGGC CCTGGCCTTT
GCCCTGGACT TCCTGCTGGC CCCCTGGGTG GCCTATCTGC AGGGGGCGGT GAACGAGCGG
CTCACGGCCC GGGTGCACCT TCTGCTGATG GATAAAGTGG GCGGCCTGCC CGACCTGACC
CCTTTTGAGA ACCCCAGCTT TCACGATGAG CTGCAGGTGT TGCGCGATCA GGCCCCCTAC
CAGCCCCTGA ACCTGCTCAT CTTTCTGGGG AGCGCCTTCC GGGGGAGCAT CACCGTGGCC
GGGGTGTTGC TGCTTTTGCT GAGCGCGGCG CCCCTTTTCC CGCTGTTGCT ATTGCTGGCC
ACCCTGCCCC AGGCCATCCT AACCTTCCGG CTGCAGAAGG GGGTGTGGGA AGCGGTGCTG
TTCACCGCGC CCGAGGCCCG CCGGATGCGC TACTTTGCCG AGGCCCTGCT CGAGGCCGAC
ACGGCCAAGG AGGTGCGCCT GTTCGGCCTG CTGCCCTTTT TTCGGGGGCG CTACCTCGAG
GCCTTCTGGG CCCTTTACCG CGCGGTGCGT CGCGCACGGG GCCGCCAGGC TCTGGGGGCC
AGCGGCCTGG TGCTTCTGGG CGCCCTGGCG ACGGCTGCGG CTCTTTTCCT GGCCCTGCGG
CAGGCCCTTT CGGGGGCCAG CGGCCTGGGC AACCTGGTGC TGGTGCTCCA GTCGGTGGGC
AGTCTGCAGC AGAACCTGTT TGGCCTGGTA CAGGACGGGG GGATGCTTTA CGAGAGCCTT
CTGTACTTCG AGCGGCTGGA GCGGTTCCTG GCCCTGCCGC CGACCCTGCG ACAGCCCCCC
AAGCCCCGGG AGGTGCGCTC CTTTGAGGAG ATCCGCTTTG AGCAGGTGGG CTTCACCTAC
CCCGACGGGA GGCGGGCCTT GCAGGACGTT AGCTTCACCC TGCGCCGGGG GGAGCGCCTG
GCCCTGGTGG GGGAGAACGG GGCGGGCAAG ACCACCCTGG TCAAGCTGCT CCTGCGCTTC
TACGATCCCG GCGAGGGGCG CATCCTGGTG GACGGGGTGG ATCTGCGTGA GCTGGATCTT
GCGGCCTGGC GCCGCCTGGT GGCCGCGGTC TTCCAGGACT TTGGCCGCTA TGCCCTAACC
CTTGAGGAAA ACATCGCCCT TTCCGACCTA AAGCACCTCC ACGACCCAAA GCGCTTAGAG
GAGGCGGCCC GGGCTGGAGG GGCCGAGGGG CTGCTCCTCC GGCTGGGGCC GGAAGCTTTG
CTCTCCAGGG CCTTTGGGGG CACCGAACTG TCCCTGGGGG AGTGGCAGCG GGTGGCGCTC
TCGCGGGCCT TCTTCCGCCA GGCCGAGCTG CTGGTTCTGG ACGAGCCCAC GGCCTCCCTG
GATCCCAAAG AGGAGGCCCA CCTCTACGCC CGCTTTGCCG AGCTGGCTAA GGGGAAAACG
GTGCTCCTCA TCACCCACCG CCTGGGCTCG GTGCGGATGG CCGACCGCAT CCTGGTACTG
AGCGGGGGGC GCCTGGTGGA GGAGGGTGAT CACGCCACCC TGCTGGCCCG TGGGGGTGCC
TACGCCGAGC TCTGGCGCTT GCAAGCCGAT CTCTACAGCC CCGACCTGGC CGACAAATGA
 
Protein sequence
MRLDRRTFRW RLVGLALRQV IQAAPLEATL LLLLLALGGL VPVGVLGFTR ALVDGLVAGL 
GEGVWGPWLW WPLLGLALAF ALDFLLAPWV AYLQGAVNER LTARVHLLLM DKVGGLPDLT
PFENPSFHDE LQVLRDQAPY QPLNLLIFLG SAFRGSITVA GVLLLLLSAA PLFPLLLLLA
TLPQAILTFR LQKGVWEAVL FTAPEARRMR YFAEALLEAD TAKEVRLFGL LPFFRGRYLE
AFWALYRAVR RARGRQALGA SGLVLLGALA TAAALFLALR QALSGASGLG NLVLVLQSVG
SLQQNLFGLV QDGGMLYESL LYFERLERFL ALPPTLRQPP KPREVRSFEE IRFEQVGFTY
PDGRRALQDV SFTLRRGERL ALVGENGAGK TTLVKLLLRF YDPGEGRILV DGVDLRELDL
AAWRRLVAAV FQDFGRYALT LEENIALSDL KHLHDPKRLE EAARAGGAEG LLLRLGPEAL
LSRAFGGTEL SLGEWQRVAL SRAFFRQAEL LVLDEPTASL DPKEEAHLYA RFAELAKGKT
VLLITHRLGS VRMADRILVL SGGRLVEEGD HATLLARGGA YAELWRLQAD LYSPDLADK