Gene Mrub_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0550 
Symbol 
ID8878627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp526668 
End bp527654 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC transporter-like protein 
Protein accessionYP_003506345 
Protein GI291294947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.136091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCC TGGAGGGGGT TTCCAAACGC TACCGGGTGC TCGAGCCCGG GCGTGGCCTC 
GGGGGCTTCG TGCGGAGCCT GGTGAAGCCG CGTTACCGGG AAATTACCGC CCTGGACAAC
ATCAGCCTCA CCGTCCCGCA GGGGCAGGTG GTCGGCTACA TCGGACCCAA CGGGGCAGGC
AAGTCCACAA CCATCAAGAT CATCGCGGGG ATCGTCCGCC CCTCGGCGGG TCGGGTTGTT
GTGGCGGGCC GAGACCCGTT CCGCCAGCGC ACCGCCCACC AGCTGGAACT CGGGGTGGTG
ATGGGCCACC GCACCCGGCT TTTCTGGGAC CTGCCGGTGC TGGAGTCGCT CCGCTACCAC
GCCAAGGTGT ATCGCCTCAG CCAGAGTGGA TTGGATCAGC GCATCGGTGC CATGGCCCGG
CAATTCGGCA TCGAGGGGTT GCTCTCGCAG CCGGTACGCC AGCTGAGCCT TGGACAGCGC
GTCCGGTGCG ACTTGGCCCT CGCCTTCCTC CACCACCCCA GGGTGCTCCT GCTCGATGAG
CCTACCATCG GCCTGGACTT CGACAGCAAG GCGTTGCTGC GGTCCGCTAT CCGTCAGGTG
GCCTCTGATC TACAGACGAC CGTCATCCTG ACGTCGCACG ACTTGGACGA TGTTGAAGCC
TTGAGCGATC GTATCGTCCT GCTCGACGAG GGCCGAGTCC TCTACGACGG AACCCTCCGA
CAACTCCGAG CCCAGCACGG CGTACTCCCC GAGCTCCGGC TAAGGCTCGA AGCCGGGGCG
GATCAGGTGC GCGCTTGGCT TGAGGGGCTG GGCGGAGTAC GGGAGGTCTA CACCCACGAC
GGCTGGGTGT GCGTCGCCCA TGAGGGGGGA GGAGCCCCTG CGGCTGTGCT TGCGCGCCTT
CTTCCACAAA CCCCGGTCAG GGAGATGACC ACCCACGAAC CCTCGATCGA GGAGGTACTC
CGGCGGGTCT ACCGGGGAGC AAGGTAG
 
Protein sequence
MIVLEGVSKR YRVLEPGRGL GGFVRSLVKP RYREITALDN ISLTVPQGQV VGYIGPNGAG 
KSTTIKIIAG IVRPSAGRVV VAGRDPFRQR TAHQLELGVV MGHRTRLFWD LPVLESLRYH
AKVYRLSQSG LDQRIGAMAR QFGIEGLLSQ PVRQLSLGQR VRCDLALAFL HHPRVLLLDE
PTIGLDFDSK ALLRSAIRQV ASDLQTTVIL TSHDLDDVEA LSDRIVLLDE GRVLYDGTLR
QLRAQHGVLP ELRLRLEAGA DQVRAWLEGL GGVREVYTHD GWVCVAHEGG GAPAAVLARL
LPQTPVREMT THEPSIEEVL RRVYRGAR