Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0479 |
Symbol | |
ID | 8878554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 466418 |
End bp | 467698 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003506276 |
Protein GI | 291294878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGGC TCATCCCCCC CACCCCCTCC CTCAAGGGCA CCCTCCGGGT TCCCGGCGAC AAGTCGGTCA CGCACCGCGG CCTCATGCTG GGCGCGCTGG CCCAGGGCGA AAGCACGCTT TACTACCCGC TCAAGGCCGG CGACACCCTC TCCACCGCCC AGGTAATGCG CCAGCTTGGG GCCGAAATTA CCGAGCAGGG CCAGCACTTT CACATCAAAG GGGTGGGCCT TCGGCTCAAA GAACCCGGCG ACGTGCTCGA CTGTGGCAAC GCCGGCACCC TGATGCGGCT GGTGGCCGGG CTTTTGTCAG GGCAGGAAAC ATTCGCGGTA CTCACCGGCG ATGCCTCGCT CCGGCGGCGG CCCATGGGCC GGGTGACCCT CCCCTTGCGG CAGATGGGCG CCCGCATCGA AGGCCGCGAG AACGGCCAGC TAGCCCCCCT GGCCATCCGG GGCGGCGGGC TGCGGGGCAT CCACTACGAG CTGCCGGTGG CCAGTGCCCA GGTCAAGAGT GCCCTGCTGC TGGCCGGGCT CTTTGCCGAG GAAGACACCG AGGTGGTAGA ACCCGCCCCC ACCCGCGACC ACACCGAGCG GGTCTTCAGG CACTACGGCC TGCCCATCGA GGTGGAAGGC CGCCTGATCC GCACCCGCCG GGCCGAGCCC TTTGCCGCCA AAGACCTCAC CGTGCCCGGC GATTTCAGCA GCGCGGCCTT TTTTATCGTG GCCGCCCTGA TCACCCCCGA TTCGGAGGTG ACCTTGGAGG GCGTGGGCCT CAACCCCACC CGCACCGGGC TGCTGACGGT GCTCAAAGAG ATGGGGGCCG ACCTGAGCTG GGAAGTGACC GAAGGGCAGG ACGGCGAGCC GGTGGGCTGG ATCCGGGCCC GCTCCTCCCA GCTCCGGGGT GTAGTGGTGG ATCCCCAGCT CATCCCGCTG ATGGTGGACG AGGTGCCCAT CCTGGCAGCG GCGGCGGCCT GGGCCGCGGG CGAGACCTAT ATTCCGGGCC TCGAGGAACT GCGGGTCAAG GAGTCCGACC GGGTAGCGGC CATCGCCAAA AACCTGCAAA ACCTGGGCGT TCCGGTCGAG GCCGGCCCCG ACTGGCTGCG GATTCGCGGC GGCCACGTGG CGGGGGGCGG TCTGGTTGAG CCCTTCCACG ACCATCGCAT CGCCATGGCT TTTGCGGTGT GTGGCCTGCC CAAAGGGGTC ACGGTGCAGG ACGCCGAGTG GGCCAGCATC AGCTTCCCAA GCTTCTGGGA AGACCTGGAA CGGCTCGCAG GTAAAAAGTA A
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Protein sequence | MERLIPPTPS LKGTLRVPGD KSVTHRGLML GALAQGESTL YYPLKAGDTL STAQVMRQLG AEITEQGQHF HIKGVGLRLK EPGDVLDCGN AGTLMRLVAG LLSGQETFAV LTGDASLRRR PMGRVTLPLR QMGARIEGRE NGQLAPLAIR GGGLRGIHYE LPVASAQVKS ALLLAGLFAE EDTEVVEPAP TRDHTERVFR HYGLPIEVEG RLIRTRRAEP FAAKDLTVPG DFSSAAFFIV AALITPDSEV TLEGVGLNPT RTGLLTVLKE MGADLSWEVT EGQDGEPVGW IRARSSQLRG VVVDPQLIPL MVDEVPILAA AAAWAAGETY IPGLEELRVK ESDRVAAIAK NLQNLGVPVE AGPDWLRIRG GHVAGGGLVE PFHDHRIAMA FAVCGLPKGV TVQDAEWASI SFPSFWEDLE RLAGKK
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