Gene Mrub_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0479 
Symbol 
ID8878554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp466418 
End bp467698 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003506276 
Protein GI291294878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGC TCATCCCCCC CACCCCCTCC CTCAAGGGCA CCCTCCGGGT TCCCGGCGAC 
AAGTCGGTCA CGCACCGCGG CCTCATGCTG GGCGCGCTGG CCCAGGGCGA AAGCACGCTT
TACTACCCGC TCAAGGCCGG CGACACCCTC TCCACCGCCC AGGTAATGCG CCAGCTTGGG
GCCGAAATTA CCGAGCAGGG CCAGCACTTT CACATCAAAG GGGTGGGCCT TCGGCTCAAA
GAACCCGGCG ACGTGCTCGA CTGTGGCAAC GCCGGCACCC TGATGCGGCT GGTGGCCGGG
CTTTTGTCAG GGCAGGAAAC ATTCGCGGTA CTCACCGGCG ATGCCTCGCT CCGGCGGCGG
CCCATGGGCC GGGTGACCCT CCCCTTGCGG CAGATGGGCG CCCGCATCGA AGGCCGCGAG
AACGGCCAGC TAGCCCCCCT GGCCATCCGG GGCGGCGGGC TGCGGGGCAT CCACTACGAG
CTGCCGGTGG CCAGTGCCCA GGTCAAGAGT GCCCTGCTGC TGGCCGGGCT CTTTGCCGAG
GAAGACACCG AGGTGGTAGA ACCCGCCCCC ACCCGCGACC ACACCGAGCG GGTCTTCAGG
CACTACGGCC TGCCCATCGA GGTGGAAGGC CGCCTGATCC GCACCCGCCG GGCCGAGCCC
TTTGCCGCCA AAGACCTCAC CGTGCCCGGC GATTTCAGCA GCGCGGCCTT TTTTATCGTG
GCCGCCCTGA TCACCCCCGA TTCGGAGGTG ACCTTGGAGG GCGTGGGCCT CAACCCCACC
CGCACCGGGC TGCTGACGGT GCTCAAAGAG ATGGGGGCCG ACCTGAGCTG GGAAGTGACC
GAAGGGCAGG ACGGCGAGCC GGTGGGCTGG ATCCGGGCCC GCTCCTCCCA GCTCCGGGGT
GTAGTGGTGG ATCCCCAGCT CATCCCGCTG ATGGTGGACG AGGTGCCCAT CCTGGCAGCG
GCGGCGGCCT GGGCCGCGGG CGAGACCTAT ATTCCGGGCC TCGAGGAACT GCGGGTCAAG
GAGTCCGACC GGGTAGCGGC CATCGCCAAA AACCTGCAAA ACCTGGGCGT TCCGGTCGAG
GCCGGCCCCG ACTGGCTGCG GATTCGCGGC GGCCACGTGG CGGGGGGCGG TCTGGTTGAG
CCCTTCCACG ACCATCGCAT CGCCATGGCT TTTGCGGTGT GTGGCCTGCC CAAAGGGGTC
ACGGTGCAGG ACGCCGAGTG GGCCAGCATC AGCTTCCCAA GCTTCTGGGA AGACCTGGAA
CGGCTCGCAG GTAAAAAGTA A
 
Protein sequence
MERLIPPTPS LKGTLRVPGD KSVTHRGLML GALAQGESTL YYPLKAGDTL STAQVMRQLG 
AEITEQGQHF HIKGVGLRLK EPGDVLDCGN AGTLMRLVAG LLSGQETFAV LTGDASLRRR
PMGRVTLPLR QMGARIEGRE NGQLAPLAIR GGGLRGIHYE LPVASAQVKS ALLLAGLFAE
EDTEVVEPAP TRDHTERVFR HYGLPIEVEG RLIRTRRAEP FAAKDLTVPG DFSSAAFFIV
AALITPDSEV TLEGVGLNPT RTGLLTVLKE MGADLSWEVT EGQDGEPVGW IRARSSQLRG
VVVDPQLIPL MVDEVPILAA AAAWAAGETY IPGLEELRVK ESDRVAAIAK NLQNLGVPVE
AGPDWLRIRG GHVAGGGLVE PFHDHRIAMA FAVCGLPKGV TVQDAEWASI SFPSFWEDLE
RLAGKK